Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01015208.1 Kokia drynarioides strain JFW-HI SEQ_130252, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  339328

Tables:   1   2   

This is table  2  of  2  ( 159 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
285536--285595
23
2.7
22
80
10
68
41
1
5
51
1.33
285520--285599
40
2.0
41
87
2
117
38
1
7
52
1.38
286265--286301
19
1.9
19
88
0
56
64
0
5
29
1.15
287286--287446
29
5.5
30
67
19
83
34
27
4
32
1.77
287279--287449
58
3.0
56
82
8
175
35
27
4
33
1.76
287404--287503
29
3.5
28
77
8
103
38
19
4
39
1.70
287375--287503
57
2.2
58
86
4
172
37
22
3
37
1.70
287425--287535
28
3.8
29
77
5
107
38
18
1
40
1.62
287457--287534
31
2.6
29
81
4
93
39
16
0
43
1.48
287518--287658
29
4.9
28
76
7
122
32
24
9
33
1.87
287519--287740
58
3.9
58
78
7
213
33
27
7
32
1.84
287520--287755
29
8.2
29
70
11
121
34
26
7
31
1.84
289601--289675
22
3.2
22
70
15
62
30
5
2
61
1.32
292605--292656
20
2.7
18
80
13
59
36
1
1
59
1.19
292607--292654
18
2.5
18
80
10
51
37
2
2
58
1.22
295372--295396
7
3.6
7
100
0
50
56
0
0
44
0.99
297102--297140
20
2.0
20
85
10
53
28
2
5
64
1.28
299786--299824
19
1.9
19
85
10
51
33
2
2
61
1.23
300716--300747
15
2.1
15
94
0
55
0
9
0
90
0.45
301316--301340
5
5.0
5
100
0
50
0
20
0
80
0.72
301714--301778
19
3.4
18
80
14
67
30
1
3
64
1.18
301715--301778
20
3.5
17
78
17
65
31
1
3
64
1.19
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
302280--302319
20
2.0
20
95
0
71
42
0
15
42
1.46
308268--308315
5
9.6
5
95
0
60
70
0
29
0
0.87
308268--308315
15
3.2
15
87
0
69
70
0
29
0
0.87
319782--319844
28
2.2
28
88
0
90
38
12
15
33
1.86
325590--325634
23
2.0
23
90
0
72
71
2
0
26
0.98
327012--327083
31
2.4
29
81
9
74
31
2
0
65
1.07
327208--327251
18
2.3
19
80
11
54
40
4
4
50
1.43
327215--327251
18
2.1
18
89
0
56
40
5
5
48
1.49
327853--327939
37
2.4
37
96
0
156
32
32
0
35
1.58
331790--331865
33
2.4
32
86
8
102
30
19
18
31
1.96
331809--331877
31
2.2
32
81
5
77
33
26
14
26
1.94
331856--331926
30
2.4
30
82
0
88
30
28
16
23
1.97
331872--331955
30
2.8
30
88
0
114
29
26
19
25
1.98
332193--332222
12
2.5
12
94
0
51
66
20
3
10
1.35
333265--333304
6
6.7
6
97
0
71
37
0
62
0
0.95
333431--333464
17
2.0
17
88
0
50
38
8
8
44
1.67
338257--338424
23
7.5
23
66
18
77
45
20
21
13
1.84

Tables:   1   2

The End!