Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01015234.1 Kokia drynarioides strain JFW-HI SEQ_130279, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  325792

Tables:   1   2   

This is table  2  of  2  ( 157 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
232307--232675
172
2.1
172
91
0
585
24
23
16
36
1.94
232601--232760
86
1.9
86
84
3
216
25
24
14
36
1.93
237111--237141
12
2.6
12
100
0
62
45
0
12
41
1.42
240011--240143
23
5.9
22
81
7
108
37
25
25
11
1.89
239983--240149
23
7.2
21
77
13
86
38
23
25
11
1.88
240218--240265
24
1.9
26
84
16
66
31
22
0
45
1.53
249715--249784
22
3.2
22
68
8
54
31
1
15
51
1.53
250525--250602
17
4.5
17
76
7
68
46
2
1
50
1.23
250523--250602
34
2.3
34
85
6
108
46
2
1
50
1.23
250569--250615
24
2.0
23
91
4
76
48
2
0
48
1.13
252299--252494
58
3.4
58
83
6
195
34
29
5
31
1.79
252297--252436
29
4.8
29
84
5
158
36
27
4
31
1.76
252332--252494
29
5.7
27
75
13
130
32
29
5
32
1.80
256277--256304
2
14.0
2
100
0
56
0
50
0
50
1.00
262967--263007
19
2.1
19
86
9
55
29
7
17
46
1.74
264736--264766
12
2.6
12
100
0
62
67
6
25
0
1.14
271908--271956
26
1.9
25
83
4
62
34
24
14
26
1.94
272689--272762
31
2.4
31
83
0
94
29
13
18
37
1.90
293745--293778
18
1.9
17
94
5
59
50
2
0
47
1.16
294144--294191
25
2.0
25
83
4
62
29
4
2
64
1.23
296257--296305
24
2.0
24
100
0
98
28
4
0
67
1.09
296868--296921
24
2.3
24
93
3
92
55
0
0
44
0.99
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
302015--302048
16
2.1
16
88
5
50
23
0
5
70
1.09
303928--303968
16
2.5
16
85
14
57
70
2
2
24
1.11
310566--310609
3
14.7
3
100
0
88
34
0
0
65
0.93
316826--316937
57
1.9
58
91
5
183
25
16
12
46
1.81
316899--316972
30
2.5
30
91
2
114
28
16
12
43
1.83
316814--316972
59
2.8
55
82
8
160
26
15
11
46
1.80
317155--317240
31
2.9
29
80
11
84
47
11
15
25
1.79
317173--317242
31
2.2
32
89
5
106
52
10
15
21
1.71
321002--321040
16
2.5
15
80
8
51
35
0
0
64
0.94
323196--323248
26
2.0
26
88
0
79
43
0
3
52
1.19
323370--323402
11
3.1
11
91
4
50
69
0
0
30
0.88
323646--323699
17
3.4
16
75
15
58
59
0
1
38
1.08
323634--323701
31
2.2
31
94
0
118
58
0
1
39
1.07
323659--323712
18
2.8
20
78
13
69
62
0
0
37
0.95
323660--323714
20
2.8
20
81
15
71
63
0
0
36
0.95

Tables:   1   2

The End!