Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01015244.1 Kokia drynarioides strain JFW-HI SEQ_130289, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  101586

Tables:   1   

This is table  1  of  1  ( 56 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
906--971
21
3.2
20
72
10
62
71
18
6
4
1.24
1677--1726
18
2.7
18
76
14
57
62
2
0
36
1.07
1834--1875
23
2.0
22
86
13
61
35
2
0
61
1.09
1828--1889
11
5.3
12
75
17
51
37
3
0
59
1.13
1622--2116
265
1.9
265
93
2
861
47
5
1
45
1.35
2080--2128
22
2.1
22
81
7
53
40
4
4
51
1.40
2160--2200
21
2.0
21
90
9
68
60
0
0
39
0.96
13385--13414
3
10.0
3
92
0
51
63
0
0
36
0.95
19573--19607
2
16.5
2
88
11
52
45
2
2
48
1.32
27623--27647
2
12.5
2
100
0
50
52
48
0
0
1.00
44065--44092
3
9.3
3
100
0
56
0
32
0
67
0.91
47930--48031
12
8.8
12
67
11
61
66
21
5
5
1.35
47916--47996
24
3.8
21
78
12
85
66
22
4
6
1.33
47942--48031
32
2.7
32
84
6
99
65
22
6
5
1.37
47916--48031
44
2.6
45
82
5
119
66
21
5
6
1.36
47916--48051
35
4.1
32
72
13
89
67
21
4
6
1.31
48429--48458
3
10.0
3
92
0
51
30
0
3
66
1.07
48573--48633
30
2.0
30
81
6
70
37
4
4
52
1.45
49249--49285
2
18.5
2
100
0
74
48
0
0
51
1.00
53631--53680
16
3.1
16
76
21
59
52
0
2
46
1.12
54500--54577
37
2.1
37
85
0
102
41
14
17
26
1.88
67090--67138
24
2.0
26
88
8
75
26
4
8
61
1.42
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
69033--69174
55
2.6
54
82
5
146
54
7
16
21
1.65
69061--69237
27
6.6
26
75
10
115
55
7
16
20
1.64
69053--69173
26
4.5
26
77
12
111
57
8
14
19
1.62
69085--69322
27
8.7
27
74
9
144
56
9
15
18
1.66
74971--74995
3
8.3
3
100
0
50
64
0
0
36
0.94
77809--78052
29
8.5
28
74
12
183
35
2
27
34
1.70
77832--78112
58
4.8
59
81
7
276
34
2
27
35
1.70
78658--78837
90
2.0
88
97
2
342
26
32
4
36
1.76
80078--80156
17
4.6
16
76
9
68
51
2
2
43
1.28
80078--80156
6
13.7
6
70
12
58
51
2
2
43
1.28
80203--80460
132
2.0
132
94
1
455
20
25
20
34
1.97
80634--81216
201
2.9
202
85
3
726
24
22
17
34
1.96
81107--81378
123
2.2
123
92
0
445
20
22
18
38
1.94
82133--82218
44
1.9
45
86
9
122
12
24
16
46
1.82
83572--83607
18
2.0
18
100
0
72
38
16
11
33
1.84
86874--87062
87
2.2
88
80
10
210
34
5
26
32
1.81
86933--87382
30
15.6
28
66
23
109
36
3
26
33
1.73
86953--87351
58
6.9
59
79
12
436
35
3
27
33
1.74
86933--87389
29
15.8
29
67
20
181
36
3
26
33
1.73
87844--88270
213
2.0
213
97
0
800
30
20
13
35
1.91
93872--93959
44
2.0
44
90
0
140
25
20
11
43
1.85
98714--98765
6
8.8
6
80
19
65
48
1
0
50
1.12
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
98715--98767
11
4.6
11
76
17
54
47
1
0
50
1.12
98707--98767
17
3.5
17
85
12
88
45
1
0
52
1.10
98707--98775
35
1.9
35
85
8
95
46
4
0
49
1.21
99485--99598
9
12.0
9
73
10
66
53
3
2
40
1.32
99511--99598
3
29.3
3
75
4
79
56
4
1
37
1.27
99511--99597
36
2.3
39
84
5
108
57
4
1
36
1.27
99485--99598
12
9.8
12
72
9
92
53
3
2
40
1.32
100597--100829
29
7.9
30
81
11
220
33
29
6
31
1.82
100610--100887
59
4.7
58
82
8
280
34
27
5
32
1.79
100757--100858
30
3.5
28
73
15
82
38
26
1
33
1.68
100755--100917
59
2.8
56
79
8
164
38
25
2
33
1.69
101182--101367
96
1.9
97
82
7
236
31
19
13
35
1.90

Tables:   1

The End!