Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01015258.1 Kokia drynarioides strain JFW-HI SEQ_130303, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  342652

Tables:   1   2   

This is table  2  of  2  ( 151 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
256553--256722
29
5.8
28
75
14
146
37
4
24
34
1.75
257792--257839
18
2.8
18
81
15
57
37
2
2
58
1.22
257829--257880
27
1.9
27
84
7
70
44
3
1
50
1.31
258939--259514
194
3.0
193
88
1
839
23
22
18
35
1.95
271425--271503
28
2.8
27
75
12
70
27
6
34
31
1.82
271574--271682
30
3.6
30
78
8
123
38
4
24
32
1.76
271574--271682
31
3.6
31
73
13
111
38
4
24
32
1.76
271431--271697
29
9.1
29
68
20
139
36
5
27
30
1.79
272781--272811
7
4.4
7
100
0
62
29
0
0
70
0.87
273985--274027
17
2.5
17
88
3
59
48
2
27
20
1.62
276610--276676
34
2.0
34
90
0
107
37
23
4
34
1.75
277411--277535
12
10.1
12
70
13
65
67
18
6
8
1.38
277471--277543
23
3.2
23
74
0
74
69
15
6
8
1.33
277441--277507
26
2.5
26
74
9
64
68
13
7
10
1.38
277529--277562
17
2.0
17
94
0
59
70
14
5
8
1.31
282097--282137
20
2.0
20
90
9
66
34
0
24
41
1.55
285300--285329
14
2.1
14
93
6
51
90
6
0
3
0.56
285308--285333
12
2.2
12
100
0
52
92
7
0
0
0.39
286131--286199
32
2.2
30
79
5
75
36
7
10
46
1.65
288956--289253
162
1.8
164
84
4
415
35
21
21
22
1.96
301537--301592
21
2.8
21
83
5
62
26
1
1
69
1.08
301548--301592
9
4.7
9
79
15
54
28
0
2
68
1.01
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
304610--304846
52
4.6
52
94
1
397
24
14
26
34
1.94
312659--312709
25
2.0
25
100
0
102
47
7
11
33
1.69
315422--315451
14
2.1
15
93
6
53
83
6
3
6
0.90
319879--319965
29
3.0
29
89
0
138
32
17
18
32
1.94
322968--323018
15
3.4
15
76
15
52
43
0
9
47
1.36
322976--323021
14
3.1
15
84
9
67
36
0
8
54
1.32
322978--323024
15
3.1
15
79
11
60
40
0
8
51
1.33
322978--323035
27
2.0
29
87
9
84
41
0
6
51
1.28
330046--330100
19
2.6
22
80
13
71
50
1
0
47
1.11

Tables:   1   2

The End!