Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01015275.1 Kokia drynarioides strain JFW-HI SEQ_130320, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  493191

Tables:   1   2   

This is table  2  of  2  ( 162 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
363341--363424
23
3.7
23
71
17
75
47
1
1
50
1.16
363544--363604
31
2.0
31
83
0
77
32
6
11
49
1.65
363990--364025
17
2.2
17
90
5
56
22
22
2
52
1.59
364825--365283
169
2.7
167
80
6
525
24
16
20
38
1.92
367007--367091
27
3.1
26
77
14
91
25
1
7
65
1.25
370347--370373
2
13.5
2
100
0
54
51
0
0
48
1.00
371523--371554
14
2.2
15
94
5
57
56
0
0
43
0.99
371515--371597
45
2.0
44
81
11
102
63
4
2
28
1.27
377675--377766
46
2.0
46
93
0
157
51
5
14
29
1.64
382760--382804
7
6.3
7
97
2
81
0
13
0
86
0.57
383083--383132
15
3.5
15
81
5
50
8
6
8
78
1.11
383453--383488
18
2.0
18
89
10
56
19
2
5
72
1.17
390951--391088
10
15.0
9
69
19
56
62
0
3
33
1.18
391015--391085
20
3.7
20
74
9
76
67
1
1
29
1.07
392958--394283
333
4.0
333
81
4
1442
26
15
24
34
1.95
401885--401910
5
5.2
5
100
0
52
38
0
0
61
0.96
402572--402627
27
2.1
27
96
0
103
39
3
23
33
1.72
405848--405906
30
2.0
30
93
0
100
45
11
18
23
1.83
405879--406034
47
3.3
47
90
1
224
44
18
17
19
1.87
409303--409373
29
2.4
29
79
9
81
42
7
9
40
1.65
414398--414993
307
1.9
307
84
5
788
39
19
11
29
1.86
419262--419322
26
2.2
28
80
11
74
65
0
0
34
0.93
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
419269--419355
32
3.0
29
77
12
90
64
0
0
35
0.94
423075--423117
23
1.9
22
81
13
52
55
11
4
27
1.55
423627--423738
31
3.7
29
75
4
98
41
16
10
31
1.82
427975--428056
42
1.9
44
82
7
107
34
3
6
56
1.42
429980--430018
20
1.9
20
85
15
53
17
10
2
69
1.28
430430--430504
30
2.4
29
81
14
80
48
1
5
45
1.33
437277--437339
24
2.6
24
87
0
90
49
11
14
25
1.76
439216--439279
24
2.7
24
85
0
83
53
9
12
25
1.68
440002--440067
34
1.9
35
87
3
98
31
7
6
54
1.53
441391--441626
118
2.0
117
81
8
275
22
14
30
33
1.93
443212--443274
21
2.9
21
76
4
54
57
3
4
34
1.36
461138--461164
11
2.5
11
100
0
54
0
7
0
92
0.38
466805--466852
20
2.4
19
83
13
60
29
0
0
70
0.87
467812--467850
20
2.0
20
90
10
62
23
2
2
71
1.10
469875--469900
11
2.4
11
100
0
52
0
0
7
92
0.39
471234--471265
2
16.0
2
100
0
64
50
0
0
50
1.00
473327--473393
22
3.0
21
76
19
57
29
0
8
61
1.27
485400--485424
13
1.9
13
100
0
50
16
12
16
56
1.68
489257--489332
25
3.0
25
81
11
84
57
0
2
39
1.12
490733--490767
16
2.2
16
100
0
70
22
20
25
31
1.98

Tables:   1   2

The End!