Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01015282.1 Kokia drynarioides strain JFW-HI SEQ_130327, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  423680

Tables:   1   2   

This is table  2  of  2  ( 152 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
349095--349164
29
2.4
29
87
0
95
42
27
1
28
1.64
351378--351411
17
1.9
17
94
5
59
58
0
0
41
0.98
352986--353094
31
3.2
31
64
28
78
40
4
5
49
1.46
352980--353124
71
2.0
71
100
0
290
39
4
5
51
1.45
356536--356608
28
2.6
28
88
2
110
47
5
19
27
1.71
360619--360648
14
2.1
14
93
0
51
33
6
60
0
1.23
366787--366825
11
3.5
11
85
3
51
7
5
0
87
0.68
372925--372959
18
1.9
18
88
0
52
31
28
14
25
1.95
378353--378411
22
2.6
22
89
2
82
13
20
25
40
1.89
378417--378494
41
1.9
41
91
0
129
10
26
21
41
1.85
378358--378491
23
6.1
23
74
15
88
10
23
23
41
1.85
382247--382326
41
2.0
41
97
0
151
47
13
7
31
1.71
383949--384047
48
2.1
48
100
0
198
22
12
34
31
1.91
387081--387118
18
2.2
18
90
4
60
63
0
36
0
0.95
393615--393647
17
2.1
16
88
11
50
60
0
21
18
1.36
397732--397845
57
2.0
57
100
0
228
40
12
26
21
1.88
398298--398350
27
2.0
27
92
0
88
16
64
1
16
1.39
401280--401323
23
1.9
23
86
9
63
65
2
4
27
1.23
404582--404614
16
2.1
15
94
5
57
57
0
0
42
0.98
405314--405358
22
2.0
22
83
8
56
48
0
2
48
1.13
406133--406167
17
2.0
18
88
5
54
71
0
8
20
1.11
406484--406570
31
2.8
31
78
1
93
45
5
12
35
1.66
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
406624--406655
5
6.4
5
96
0
55
84
0
15
0
0.63
419804--419888
4
21.2
4
77
9
75
67
0
32
0
0.91
419820--419892
9
9.4
8
73
23
50
64
0
35
0
0.94
419823--419878
21
2.7
21
94
2
96
62
0
37
0
0.95
419804--419888
21
4.2
22
81
11
78
67
0
32
0
0.91
419928--419973
20
2.4
19
82
7
56
34
2
2
60
1.21
422964--423044
28
2.9
28
81
5
76
23
3
23
49
1.66
422977--423044
14
4.9
14
71
13
52
25
1
23
50
1.58
423309--423438
45
2.9
45
85
0
152
20
21
24
33
1.97
423340--423445
45
2.4
45
90
0
158
19
18
25
35
1.95

Tables:   1   2

The End!