Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01015284.1 Kokia drynarioides strain JFW-HI SEQ_130329, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  395889

Tables:   1   2   

This is table  2  of  2  ( 155 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
319345--319427
31
3.0
26
79
15
69
27
7
8
56
1.55
319378--319461
31
2.7
31
89
5
125
29
10
9
50
1.69
319472--319520
24
2.1
24
85
7
66
24
12
10
53
1.69
324810--324851
13
3.2
13
100
0
84
38
7
30
23
1.82
335839--335877
19
2.1
19
85
4
53
51
0
0
48
1.00
339692--339863
23
7.4
24
80
3
167
40
17
18
23
1.91
339693--339863
47
3.7
46
81
6
150
39
17
18
23
1.92
343225--343257
17
2.0
17
88
5
50
15
0
9
75
1.03
353442--353549
35
3.0
35
84
2
135
29
27
9
33
1.88
355029--355094
6
11.2
6
74
9
64
42
3
1
53
1.25
355029--355094
17
3.8
17
87
4
87
42
3
1
53
1.25
355797--355933
22
6.0
22
73
12
98
58
2
3
35
1.28
355811--355923
16
7.7
15
73
14
76
58
0
3
37
1.21
355811--355933
3
38.7
3
71
13
77
59
0
4
35
1.22
355866--355925
13
4.8
13
85
6
88
61
0
1
36
1.06
356658--356721
32
2.0
32
81
6
76
20
9
7
62
1.50
356993--357370
29
13.0
29
73
11
272
33
28
4
33
1.77
356994--357248
59
4.4
57
87
3
296
34
28
2
33
1.72
356994--357370
88
4.3
87
78
8
342
33
28
4
33
1.77
357493--357526
17
2.1
16
88
5
50
11
8
8
70
1.34
357623--357814
96
2.0
96
85
6
264
29
19
14
37
1.90
358971--359022
22
2.3
22
90
3
77
23
23
17
36
1.95
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
358984--359034
22
2.3
22
93
0
84
13
27
19
39
1.90
366334--366399
33
2.0
34
93
3
116
36
0
15
48
1.45
367245--367284
10
3.9
10
83
3
53
62
0
0
37
0.95
367245--367284
14
3.0
13
89
10
55
62
0
0
37
0.95
367261--367311
16
3.1
16
76
15
50
49
5
0
45
1.26
367023--367535
256
2.0
246
83
7
629
45
6
8
38
1.61
374766--374842
6
13.2
6
73
10
70
41
2
1
54
1.22
374757--374842
17
5.2
17
79
12
90
41
2
1
54
1.20
374772--374805
13
2.8
12
91
8
52
35
2
0
61
1.11
374744--374839
30
3.4
28
80
9
104
39
3
2
55
1.28
374770--374840
11
6.2
11
76
12
54
42
2
1
53
1.24
385109--386342
622
2.0
612
99
0
2333
18
29
21
29
1.97
387515--387649
69
2.0
69
89
0
207
18
35
19
26
1.95

Tables:   1   2

The End!