Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01015298.1 Kokia drynarioides strain JFW-HI SEQ_130343, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  570056

Tables:   1   2   

This is table  2  of  2  ( 143 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
501092--501120
3
9.7
3
100
0
58
68
0
31
0
0.89
501187--501220
3
11.3
3
100
0
68
64
0
35
0
0.94
501092--501285
99
2.0
99
96
0
361
38
3
24
34
1.73
507844--507889
24
1.9
23
82
8
56
41
6
4
47
1.49
515984--516017
17
1.9
17
88
5
50
32
0
5
61
1.20
516797--516876
31
2.6
31
80
7
92
50
13
6
30
1.66
517212--517266
8
6.8
8
76
16
51
0
27
1
70
0.97
526720--526768
22
2.1
24
85
14
68
67
4
18
10
1.36
526736--526768
16
2.0
17
88
5
50
72
0
18
9
1.10
531873--532419
255
2.1
256
78
6
583
38
17
15
28
1.90
533658--533804
75
2.0
72
92
4
240
36
12
7
44
1.70
536389--536459
34
2.1
34
83
0
88
56
7
2
33
1.41
536851--536932
36
2.3
36
84
0
110
35
2
1
60
1.17
546622--546652
13
2.4
13
100
0
62
29
41
0
29
1.56
547103--547149
18
2.7
18
75
18
55
38
0
4
57
1.18
549560--549663
42
2.6
40
82
8
124
50
11
9
28
1.70
549603--549661
19
3.0
20
68
9
59
52
10
8
28
1.64
562406--562483
35
2.2
36
83
2
95
38
21
16
23
1.93
563031--563063
13
2.4
14
90
5
50
9
3
42
45
1.51
563045--563090
21
2.2
21
84
7
58
17
0
30
52
1.45
563052--563090
20
1.9
21
89
5
62
17
0
28
53
1.44
563388--563703
126
2.5
124
81
6
330
32
23
18
26
1.97
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
563575--563997
139
3.0
139
81
6
451
31
23
18
26
1.98

Tables:   1   2

The End!