Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01015302.1 Kokia drynarioides strain JFW-HI SEQ_130347, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  404437

Tables:   1   2   

This is table  2  of  2  ( 149 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
327877--327977
46
2.2
46
91
3
159
47
8
5
37
1.59
338014--338214
61
3.3
62
83
2
255
28
24
12
34
1.92
338113--338242
29
4.4
29
70
14
95
30
27
13
28
1.94
338616--338649
15
2.3
15
89
0
50
32
32
2
32
1.73
341518--341546
13
2.2
13
100
0
58
55
27
0
17
1.42
348826--348877
21
2.3
23
80
9
63
63
0
34
1
1.06
359134--359194
22
2.6
23
76
12
61
62
3
0
34
1.12
359259--359295
18
2.0
19
89
5
58
54
0
0
45
1.00
359825--359887
25
2.5
24
80
10
65
57
6
0
36
1.24
359873--359913
19
2.2
19
86
0
55
56
2
2
39
1.26
360851--360944
45
2.1
46
95
2
172
40
17
7
35
1.77
365804--365872
24
2.9
24
91
0
111
57
8
8
24
1.57
365794--365878
24
3.5
24
86
0
107
52
9
10
27
1.66
367805--367891
24
3.7
23
82
3
84
54
6
11
27
1.62
372355--372405
23
2.3
21
83
9
66
5
21
1
70
1.18
373589--373628
21
1.9
21
89
0
62
62
2
0
35
1.09
374123--374151
10
2.7
11
94
5
51
17
0
0
82
0.66
374342--374394
6
8.8
6
91
0
79
11
32
22
33
1.90
374342--374390
18
2.7
18
96
0
89
10
34
22
32
1.88
375405--375478
12
6.2
12
75
6
69
27
2
29
40
1.70
375410--375471
18
3.4
18
81
14
74
25
3
29
41
1.71
375410--375488
18
4.4
18
77
0
68
25
2
30
41
1.68
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
375415--375488
36
2.1
36
82
5
87
25
2
31
40
1.70
375788--375814
12
2.2
12
100
0
54
37
11
37
14
1.82
376146--376171
3
8.7
3
100
0
52
65
34
0
0
0.93
379149--379211
25
2.6
25
92
2
110
20
20
12
46
1.83
386418--386529
23
4.9
23
78
3
102
35
4
14
45
1.65
386427--386524
46
2.1
46
82
0
124
35
4
14
45
1.64
397493--397545
21
2.5
21
93
0
88
35
24
18
20
1.95

Tables:   1   2

The End!