Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01015335.1 Kokia drynarioides strain JFW-HI SEQ_130382, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  733037

Tables:   1   2   

This is table  2  of  2  ( 160 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
464320--464357
20
1.9
20
100
0
76
26
7
7
57
1.54
464324--464367
20
2.2
20
84
8
54
29
9
11
50
1.69
479544--479670
58
2.2
58
80
5
141
47
8
18
25
1.77
487840--487904
30
2.2
30
83
5
78
47
4
4
43
1.44
501468--501547
39
2.0
40
83
7
101
35
20
12
32
1.90
520870--520912
15
2.9
14
80
19
52
32
0
4
62
1.15
523833--524136
151
2.0
153
94
1
531
34
4
13
47
1.63
525855--525907
19
2.7
20
82
2
63
62
0
3
33
1.13
532798--532835
20
1.9
20
89
10
60
23
10
0
65
1.23
547426--547455
15
1.9
16
93
6
53
53
0
0
46
1.00
547425--547465
13
2.9
15
78
10
50
58
0
0
41
0.98
553475--553613
31
4.6
30
72
16
110
23
14
11
50
1.75
553428--553613
89
2.1
88
83
5
223
24
13
11
50
1.75
554491--554544
27
2.0
26
89
7
81
37
5
7
50
1.54
554484--554546
28
2.2
28
83
13
85
39
4
9
46
1.58
574177--574218
13
3.3
12
81
12
57
47
0
7
45
1.30
591876--591938
31
2.0
31
84
0
81
39
14
9
36
1.78
604890--605016
23
5.6
22
79
9
96
37
25
25
12
1.91
604952--605027
23
3.3
23
87
7
93
39
21
27
11
1.88
605091--605138
24
1.9
26
84
16
66
31
22
0
45
1.53
607125--607154
15
1.9
16
93
6
53
3
6
0
90
0.56
614069--614100
2
16.0
2
93
0
55
53
0
0
46
1.00
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
617193--617219
6
4.5
6
100
0
54
14
33
0
51
1.43
635941--635982
21
2.0
20
86
13
59
50
0
2
47
1.14
641994--642024
11
2.7
11
95
5
53
70
0
0
29
0.87
645903--645950
14
3.3
14
83
11
69
27
2
0
70
0.98
645903--645951
16
3.3
15
86
8
73
26
2
0
71
0.97
646355--646388
18
1.9
17
88
5
50
35
0
5
58
1.22
656765--656834
31
2.3
30
78
7
77
38
7
5
48
1.54
667878--667903
2
13.0
2
100
0
52
50
0
0
50
1.00
679233--679271
4
9.2
4
94
5
60
0
0
30
69
0.89
697033--697214
96
1.9
96
83
6
235
37
14
19
29
1.91
697426--697487
28
2.2
28
85
0
79
25
8
25
40
1.83
697560--697759
29
6.8
29
76
4
177
36
4
25
34
1.75
697527--697759
59
3.9
59
84
3
290
35
4
25
33
1.77
697538--697759
30
7.5
30
75
10
172
35
4
25
34
1.76
704768--704796
1
29.0
1
100
0
58
0
0
0
100
0.00
704982--705133
77
1.9
78
88
5
227
30
9
8
50
1.65
728068--728108
21
2.0
21
85
0
55
39
0
4
56
1.21
728326--728414
25
3.4
25
68
18
72
40
0
8
50
1.34

Tables:   1   2

The End!