Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01015344.1 Kokia drynarioides strain JFW-HI SEQ_130391, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  296268

Tables:   1   2   

This is table  2  of  2  ( 145 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
181076--181389
114
2.8
112
81
3
333
15
19
27
36
1.93
186521--186599
40
2.0
40
87
0
113
53
7
5
34
1.51
190976--191028
26
2.0
27
88
3
81
39
28
16
15
1.89
195659--195699
17
2.4
17
83
4
55
31
0
4
63
1.15
198950--199012
32
2.0
32
100
0
126
19
25
12
42
1.86
222542--222567
2
13.0
2
100
0
52
50
0
50
0
1.00
228535--228563
2
14.5
2
100
0
58
48
0
0
51
1.00
228751--228808
15
3.9
14
77
18
55
24
1
6
67
1.25
229324--229378
28
2.0
28
81
0
65
67
0
7
25
1.16
230355--230389
10
3.4
10
88
4
52
71
0
28
0
0.86
233168--233199
2
16.0
2
100
0
64
50
0
0
50
1.00
253282--253327
15
3.1
15
78
6
58
26
0
10
63
1.27
253443--253499
30
1.9
29
92
3
96
42
0
3
54
1.17
253443--253497
17
3.5
17
68
31
50
40
0
3
56
1.17
253826--254129
159
1.9
159
90
0
482
27
11
17
43
1.83
262392--262475
32
2.6
33
78
3
89
59
7
4
28
1.44
268913--269026
59
1.9
58
91
1
183
46
17
0
35
1.54
270313--270376
17
3.4
17
72
25
56
57
3
1
37
1.24
270771--270823
22
2.2
24
77
9
56
45
1
1
50
1.23
273245--273404
52
3.1
52
68
22
156
53
5
3
37
1.40
273253--273413
50
3.2
50
68
23
147
53
6
2
37
1.40
273215--273419
102
2.0
102
99
0
401
51
6
2
39
1.44
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
276541--277089
275
2.0
275
96
0
1008
29
12
22
35
1.91
277877--277946
11
6.4
11
72
8
54
12
4
1
81
0.90
295262--295315
26
2.1
26
85
0
72
59
24
3
12
1.50

Tables:   1   2

The End!