Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01015372.1 Kokia drynarioides strain JFW-HI SEQ_130419, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  487716

Tables:   1   2   

This is table  2  of  2  ( 153 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
397059--397099
18
2.2
19
83
12
50
34
2
60
2
1.23
397736--397784
21
2.3
20
73
10
53
71
20
2
6
1.18
401172--401206
6
5.8
6
96
0
61
2
62
0
34
1.10
402970--403014
22
2.0
23
86
4
65
62
6
0
31
1.21
403001--403034
16
2.0
18
88
11
54
61
8
0
29
1.26
407881--407921
19
2.2
19
86
4
57
73
4
0
21
1.02
407957--407982
2
13.0
2
100
0
52
50
0
0
50
1.00
413810--413843
15
2.3
15
89
0
50
41
5
0
52
1.25
414208--414553
24
13.8
24
68
13
151
35
18
28
18
1.94
414201--414435
101
2.3
100
84
3
303
37
17
25
19
1.94
414201--414441
50
4.8
50
83
2
286
36
17
26
19
1.94
414364--414563
75
2.6
78
80
3
210
36
19
27
16
1.93
415819--415891
31
2.4
31
88
11
107
46
20
12
20
1.82
416033--416094
12
5.3
12
69
19
51
56
19
4
19
1.59
416468--416551
35
2.4
35
86
5
118
16
2
21
59
1.48
416692--416761
30
2.3
29
83
13
81
25
11
17
45
1.81
416980--417043
31
2.1
31
87
0
92
50
6
12
31
1.65
418180--418226
24
2.0
24
86
0
67
63
4
0
31
1.13
426499--426544
24
1.9
23
86
8
65
54
6
4
34
1.46
429920--429958
6
6.5
6
87
0
51
46
0
30
23
1.53
431669--431706
17
2.2
17
90
0
58
26
2
2
68
1.16
432661--432694
17
2.0
17
88
11
52
52
0
20
26
1.46
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
433093--433126
13
2.8
12
86
8
50
35
0
17
47
1.48
435767--435813
23
2.0
23
88
8
69
4
25
23
46
1.70
438186--438230
16
2.8
17
75
24
53
42
0
0
57
0.98
438186--438228
6
6.8
6
81
7
50
39
0
0
60
0.97
444506--444566
31
1.9
32
86
3
88
39
8
11
40
1.71
445111--445175
15
4.2
15
71
21
62
52
1
1
44
1.19
445198--445325
60
2.1
62
89
2
197
44
0
3
51
1.22
453615--453689
24
3.1
24
88
0
105
25
8
8
58
1.54
454488--454518
5
6.4
5
96
3
55
80
0
0
19
0.71
455749--455803
21
2.6
21
91
0
83
63
5
3
27
1.33
459148--459259
31
3.6
31
78
7
118
46
9
19
24
1.80

Tables:   1   2

The End!