Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01015380.1 Kokia drynarioides strain JFW-HI SEQ_130427, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  614474

Tables:   1   2   

This is table  2  of  2  ( 156 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
451320--451363
21
2.0
22
87
12
65
68
4
0
27
1.09
453381--453429
18
2.9
17
77
16
57
12
18
0
69
1.19
468620--468686
30
2.2
30
83
2
80
38
1
4
55
1.29
470378--470419
18
2.4
18
85
14
54
59
0
0
40
0.97
470880--470926
17
3.1
15
87
9
60
21
0
4
74
0.99
474434--474708
137
2.0
137
88
2
410
25
13
12
48
1.78
475612--475676
31
2.1
31
100
0
130
41
10
18
29
1.84
479027--479124
50
2.0
50
95
0
178
23
7
23
45
1.77
496687--496721
6
5.8
6
93
0
61
82
0
0
17
0.66
500312--500414
52
2.0
52
96
1
190
21
9
18
50
1.75
500998--501075
41
2.0
40
87
5
113
55
6
5
33
1.48
501473--501506
13
2.5
14
90
4
52
44
0
0
55
0.99
502423--502477
29
1.9
28
85
10
76
25
3
10
60
1.47
509405--509842
218
2.0
217
99
0
867
27
15
14
42
1.86
515868--515913
15
3.1
15
96
0
74
0
21
32
45
1.52
515869--515913
18
2.5
18
92
0
72
0
22
33
44
1.53
515869--515912
3
14.7
3
90
0
52
0
22
34
43
1.54
517763--517817
27
2.0
27
100
0
110
43
18
23
14
1.87
520070--520120
26
2.0
26
92
0
84
43
13
13
29
1.83
521238--521366
23
5.6
23
88
7
88
38
18
11
31
1.87
521261--521326
12
5.7
11
72
21
55
37
22
12
27
1.90
521238--521365
46
2.7
47
86
5
181
39
18
11
30
1.87
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
521262--521376
23
5.0
23
86
4
108
42
16
12
28
1.84
530998--531028
13
2.3
14
94
5
55
12
0
3
83
0.75
536170--536198
2
14.5
2
100
0
58
0
48
0
51
1.00
537259--537287
8
3.8
8
90
9
51
93
0
6
0
0.36
537259--537289
15
2.1
15
100
0
62
93
0
6
0
0.35
540869--540893
12
2.1
12
100
0
50
28
16
32
24
1.96
549705--549730
3
8.7
3
100
0
52
69
0
30
0
0.89
558005--558036
3
10.7
3
100
0
64
68
0
31
0
0.90
571618--571655
19
2.0
20
84
5
51
57
0
0
42
0.98
580180--580208
2
14.5
2
100
0
58
48
0
0
51
1.00
594728--594758
2
15.5
2
93
0
53
0
3
48
48
1.17
599699--599725
5
5.4
5
100
0
54
18
0
18
62
1.32
600802--600973
86
2.0
86
95
0
308
23
28
22
25
1.99
608253--608300
25
1.9
25
100
0
96
56
10
12
20
1.65

Tables:   1   2

The End!