Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01001627.1 Kokia drynarioides strain JFW-HI SEQ_113264, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  288041

Tables:   1   2   

This is table  2  of  2  ( 144 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
273615--273670
16
3.5
17
76
13
57
37
1
1
58
1.19
275297--275380
22
3.7
22
71
13
80
60
2
10
26
1.42
275297--275387
21
4.0
23
71
14
80
57
2
10
29
1.45
275402--275442
21
2.0
21
85
0
55
73
2
0
24
0.96
275406--275449
23
1.9
23
86
9
63
72
2
2
22
1.07
275490--275514
5
5.0
5
100
0
50
80
0
0
20
0.72
277276--277576
42
7.2
42
83
5
324
29
17
22
30
1.96
277270--277578
84
3.7
83
83
2
357
29
17
22
30
1.97
277270--277522
126
2.0
126
89
1
382
28
17
24
29
1.97
277276--277575
126
2.4
125
84
3
379
30
17
22
30
1.96
280315--280344
16
1.9
15
93
6
51
23
20
0
56
1.42
280655--280850
42
4.5
42
83
6
187
27
14
27
31
1.95
280680--280847
45
3.8
45
85
7
222
25
15
26
32
1.95
280680--280847
89
1.9
86
86
6
239
25
15
26
32
1.95
282064--282470
53
7.6
53
85
1
519
28
14
21
36
1.92
283551--284287
49
15.1
49
81
0
643
21
26
16
36
1.94
285304--285360
19
2.9
21
80
15
68
3
21
0
75
0.95
285309--285368
25
2.5
23
81
13
68
5
15
0
80
0.88
285304--285359
20
2.9
20
84
12
73
3
21
0
75
0.96
285327--285368
10
4.3
10
80
14
52
7
11
0
80
0.88
286115--286214
48
2.1
48
100
0
200
22
20
8
50
1.74
287015--287131
21
5.2
21
66
19
58
61
1
9
27
1.36
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
287018--287108
47
1.9
47
86
8
132
58
2
10
28
1.44
287086--287137
19
2.7
19
80
11
52
71
0
7
21
1.11

Tables:   1   2

The End!