Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01000235.1 Kokia drynarioides strain JFW-HI SEQ_110959, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  33994

Tables:   1   

This is table  1  of  1  ( 23 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
536--868
175
1.9
178
80
5
388
33
16
11
39
1.84
715--2751
153
13.4
153
80
4
1760
35
17
11
35
1.86
715--2751
305
6.7
306
80
4
1909
35
17
11
35
1.86
715--2628
604
3.1
601
81
5
2030
35
17
11
35
1.86
3988--4076
30
3.0
30
88
0
133
11
28
40
20
1.86
4944--5020
40
1.9
40
97
0
145
35
25
15
23
1.94
6711--6750
14
2.9
14
84
0
53
5
22
7
65
1.38
7546--7669
62
2.0
62
100
0
248
29
16
4
50
1.65
7524--7652
31
4.1
32
71
20
110
28
15
3
51
1.61
7828--8129
152
2.0
152
81
3
358
28
17
9
45
1.79
8079--8191
60
1.9
60
84
0
154
24
11
7
56
1.59
13190--13302
36
3.1
36
83
0
145
35
26
11
26
1.91
13357--13838
23
21.0
23
84
1
572
46
13
5
34
1.66
15960--15999
18
2.2
18
86
8
55
37
20
2
40
1.66
16820--16933
36
3.2
36
83
0
156
35
22
13
28
1.92
17865--17906
8
5.4
8
82
2
50
4
4
2
88
0.71
17865--17906
16
2.7
15
82
7
57
4
4
2
88
0.71
17865--17905
18
2.4
17
84
15
57
4
4
2
87
0.72
18035--18187
76
2.0
76
100
0
306
38
16
19
24
1.92
20947--20976
15
2.0
15
100
0
60
26
20
13
40
1.89
25350--25388
16
2.5
16
87
4
53
15
5
0
79
0.90
29392--29440
21
2.3
21
82
10
55
55
4
14
26
1.57
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
29400--29440
22
1.9
21
85
5
55
56
4
12
26
1.56

Tables:   1

The End!