Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01002370.1 Kokia drynarioides strain JFW-HI SEQ_114448, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  62484

Tables:   1   

This is table  1  of  1  ( 27 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--25
2
12.5
2
100
0
50
48
0
0
52
1.00
251--321
34
2.1
34
100
0
142
35
16
18
29
1.93
2750--2965
108
2.0
108
97
0
405
39
9
8
42
1.68
2960--2995
16
2.3
16
95
4
65
44
5
5
44
1.50
6373--6407
17
2.0
18
88
5
54
60
11
8
20
1.57
12069--12193
63
2.0
63
82
3
151
48
4
10
37
1.56
12467--12504
9
4.3
9
90
6
60
52
0
0
47
1.00
12815--12844
10
3.0
10
95
0
51
46
0
13
40
1.43
21889--21927
20
2.0
20
85
10
53
10
12
5
71
1.28
28308--28356
25
2.0
25
88
8
73
26
0
10
63
1.26
30110--30180
21
3.1
24
75
19
71
53
1
0
45
1.09
30269--30319
16
3.2
16
91
0
75
39
1
29
29
1.68
35837--35884
17
2.7
17
81
12
53
39
8
2
50
1.44
45029--45069
15
2.7
15
88
3
55
85
0
12
2
0.70
45144--45181
18
2.1
18
95
0
67
60
15
18
5
1.53
45195--45423
102
2.3
99
87
2
314
44
12
28
13
1.81
45339--45380
21
2.0
21
86
9
59
52
16
23
7
1.68
45574--45613
15
2.6
16
84
7
57
72
0
27
0
0.85
50774--50849
7
11.0
7
73
16
52
42
27
0
30
1.56
50781--50864
28
3.0
29
75
19
90
41
28
0
29
1.56
50756--50857
35
2.9
35
81
4
118
42
30
0
26
1.62
52092--52157
32
2.1
32
100
0
132
40
6
18
34
1.75
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
54832--54874
20
2.2
20
91
0
68
69
11
6
11
1.35
56502--56565
20
3.2
20
80
8
69
62
3
1
32
1.20
58038--58085
25
2.0
24
83
4
60
35
4
2
58
1.29
58127--58153
7
3.9
7
100
0
54
14
0
0
85
0.61
58953--59104
76
2.0
76
97
1
288
26
21
7
44
1.79

Tables:   1

The End!