Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01002702.1 Kokia drynarioides strain JFW-HI SEQ_114984, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  12289

Tables:   1   

This is table  1  of  1  ( 17 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
9--2995
281
10.6
280
82
4
3079
36
15
15
33
1.88
9--2995
561
5.3
557
82
4
3050
36
15
15
33
1.88
4939--5003
6
11.2
6
74
9
55
41
3
1
53
1.25
4931--5003
17
4.2
17
81
10
85
42
2
1
53
1.23
4938--4989
19
2.9
19
86
11
74
36
3
1
57
1.28
4918--5003
11
7.6
11
72
10
50
40
3
2
53
1.31
5732--5795
16
3.9
16
76
9
58
54
1
3
40
1.25
5733--5843
3
35.0
3
69
13
62
58
0
3
36
1.22
5733--5833
22
4.6
22
77
12
102
57
0
2
38
1.21
5739--5834
13
7.5
12
78
10
75
58
1
2
38
1.17
5783--5835
13
4.2
13
85
4
81
62
0
1
35
1.06
5774--5847
25
2.8
26
80
10
71
63
0
2
33
1.09
6902--7245
29
11.8
29
78
8
285
32
29
5
32
1.80
6898--7249
59
6.0
59
80
6
312
32
30
5
32
1.79
7055--7244
28
6.6
28
78
11
163
32
30
6
31
1.82
7476--7667
96
2.0
96
83
4
244
29
19
14
36
1.91
11872--12042
93
1.8
95
83
5
231
41
9
8
40
1.68

Tables:   1

The End!