Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01003602.1 Kokia drynarioides strain JFW-HI SEQ_116487, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  118110

Tables:   1   

This is table  1  of  1  ( 29 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4701--4727
3
9.0
3
100
0
54
33
0
0
66
0.92
11351--11377
3
9.0
3
100
0
54
0
33
0
66
0.92
31625--31650
5
5.2
5
100
0
52
0
19
0
80
0.71
37524--37579
29
1.9
30
88
3
87
41
1
8
48
1.45
38059--38117
12
4.7
13
83
8
86
59
0
0
40
0.97
38059--38117
25
2.4
25
100
0
118
59
0
0
40
0.97
39802--39860
29
2.2
25
76
21
66
37
1
1
59
1.18
41332--41391
24
2.5
24
91
2
93
56
0
1
41
1.09
46135--46169
14
2.5
14
95
0
61
34
22
2
40
1.69
59684--59730
23
2.0
23
100
0
94
17
25
17
40
1.90
64518--64567
23
2.2
23
92
7
84
48
6
0
46
1.27
64639--64681
20
2.2
20
84
16
54
51
0
0
48
1.00
66966--67020
29
2.0
29
85
7
78
58
3
9
29
1.46
67246--67285
21
2.0
20
86
13
57
42
0
0
57
0.98
70208--70243
9
3.9
9
96
3
63
0
13
8
77
0.98
70356--70381
13
2.0
13
100
0
52
61
7
0
30
1.24
76081--76143
29
2.1
30
85
2
83
38
11
12
38
1.79
76952--76980
2
14.5
2
100
0
58
51
0
0
48
1.00
77609--77702
39
2.4
39
82
8
111
28
22
11
37
1.89
80740--80766
6
4.5
6
100
0
54
14
33
0
51
1.43
82424--82455
14
2.3
14
94
0
55
21
0
0
78
0.76
82398--82454
26
2.2
26
83
0
69
21
1
3
73
1.07
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
85268--85297
8
3.8
8
95
0
51
66
6
0
26
1.16
85306--85350
6
7.5
6
100
0
90
15
0
0
84
0.62
86306--86350
22
2.0
22
91
0
72
77
0
13
8
0.98
99267--99305
20
1.9
20
84
5
51
41
5
7
46
1.55
105148--105534
196
2.0
197
88
2
580
31
11
21
35
1.90
106545--106577
15
2.2
15
100
0
66
18
27
12
42
1.85
117265--117310
21
2.1
22
84
4
58
15
28
0
56
1.39

Tables:   1

The End!