Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01003910.1 Kokia drynarioides strain JFW-HI SEQ_116974, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  94926

Tables:   1   

This is table  1  of  1  ( 28 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
415--485
32
2.3
31
88
9
108
57
7
2
32
1.40
4628--4699
27
2.7
27
93
4
110
26
12
37
23
1.90
4639--4715
27
2.9
27
90
0
73
27
14
35
23
1.93
5635--5686
17
2.8
20
75
22
58
71
5
0
23
1.07
6395--6434
19
2.1
19
86
9
55
32
0
2
65
1.06
26312--26375
34
1.9
34
93
3
112
32
14
17
35
1.89
49304--49466
82
2.0
82
82
0
200
49
9
8
31
1.66
50998--51047
18
2.8
18
96
0
91
38
26
28
8
1.84
51724--51758
18
1.9
18
88
0
52
37
20
8
34
1.83
52009--52047
18
2.2
17
90
4
60
41
0
0
58
0.98
52231--52263
16
2.1
16
94
0
57
48
0
3
48
1.17
52336--52386
24
2.1
24
96
0
93
25
7
9
56
1.58
52344--52396
24
2.2
24
89
0
79
32
11
9
47
1.71
56618--56661
21
2.1
21
100
0
88
34
13
18
34
1.90
66033--66276
121
2.0
121
95
0
443
33
13
27
25
1.93
67705--67761
18
2.8
20
79
12
55
42
0
5
52
1.24
69206--69241
18
2.0
18
94
0
63
52
2
0
44
1.15
69412--69454
22
2.0
22
90
0
68
67
0
0
32
0.91
69710--69744
15
2.3
15
95
0
61
25
17
22
34
1.96
70327--70368
21
2.0
22
85
4
59
61
2
2
33
1.21
70327--70368
22
2.0
21
86
13
59
61
2
2
33
1.21
71202--71241
20
2.0
20
85
5
53
60
2
10
27
1.42
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
71675--71811
12
12.1
12
70
12
67
68
20
3
7
1.29
71677--71807
67
2.0
67
81
6
158
67
20
3
7
1.31
73602--73630
6
4.8
6
100
0
58
17
48
17
17
1.82
86180--86209
8
3.8
8
100
0
60
0
10
0
90
0.47
86449--86482
16
2.1
17
88
5
52
67
0
0
32
0.91
86691--86726
2
18.0
2
100
0
72
50
0
0
50
1.00

Tables:   1

The End!