Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01003933.1 Kokia drynarioides strain JFW-HI SEQ_117015, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  34131

Tables:   1   

This is table  1  of  1  ( 20 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
11052--11098
18
2.6
18
86
3
67
31
0
2
65
1.04
11888--11923
18
2.0
18
89
10
56
66
5
0
27
1.13
12031--12082
24
2.4
21
82
17
63
44
1
0
53
1.11
14842--14901
30
2.0
30
86
0
84
45
26
6
21
1.77
15144--15185
7
5.7
7
79
20
50
40
2
0
57
1.12
15152--15246
17
5.5
17
80
1
82
35
1
7
55
1.35
15214--15255
17
2.4
17
88
4
57
47
0
2
50
1.14
15360--15426
35
1.9
35
87
6
100
35
37
7
19
1.80
15998--16080
6
13.7
6
72
7
51
55
2
4
37
1.34
15998--16080
15
5.3
15
76
13
78
55
2
4
37
1.34
17193--17505
29
10.7
28
66
16
109
33
24
3
38
1.73
17204--17560
59
6.1
58
80
5
308
32
24
4
38
1.75
17278--17560
29
9.5
31
66
16
98
32
24
4
38
1.76
17362--17560
61
3.3
59
83
5
188
31
25
4
39
1.76
17275--17560
119
2.4
119
82
6
332
32
24
4
38
1.76
17822--18007
96
1.9
97
88
5
279
30
17
14
37
1.89
30435--30473
13
2.9
13
81
7
51
56
0
2
41
1.13
31129--31203
23
3.4
22
75
14
73
14
6
24
54
1.64
33972--34015
10
4.7
10
81
16
58
79
0
20
0
0.73
33972--34013
17
2.5
16
92
7
66
80
0
19
0
0.70

Tables:   1

The End!