Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01004451.1 Kokia drynarioides strain JFW-HI SEQ_117855, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  95112

Tables:   1   

This is table  1  of  1  ( 19 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
12852--12877
6
4.3
6
100
0
52
15
19
30
34
1.93
13404--13429
3
8.7
3
100
0
52
34
0
34
30
1.58
23874--23905
7
4.7
7
92
7
57
0
9
0
90
0.45
23874--23905
13
2.4
14
94
5
57
0
9
0
90
0.45
33614--33673
9
6.3
9
71
17
50
56
0
3
40
1.16
34850--34893
22
1.9
24
86
9
65
47
0
4
47
1.22
35149--35190
19
2.2
20
86
4
59
59
0
4
35
1.19
54351--54574
60
3.7
57
74
17
179
28
17
16
36
1.93
54382--54926
119
4.5
118
73
11
394
30
18
14
36
1.90
54351--54926
59
9.6
58
72
12
328
30
17
14
37
1.90
56236--56269
12
2.8
12
86
0
50
2
14
44
38
1.61
56884--56943
22
2.7
22
100
0
120
35
5
10
50
1.58
56992--57035
20
2.2
20
83
0
52
68
2
4
25
1.20
57255--57598
60
5.7
58
76
12
302
36
16
18
27
1.93
57242--57498
118
2.2
120
82
6
319
37
17
18
26
1.93
59061--59118
28
2.1
28
83
6
73
15
0
13
70
1.17
72536--72576
19
2.3
18
84
12
50
46
0
2
51
1.14
83526--83560
17
2.0
17
88
5
52
22
5
8
62
1.45
83711--83778
18
3.8
17
75
7
55
61
5
1
30
1.28

Tables:   1

The End!