Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01004991.1 Kokia drynarioides strain JFW-HI SEQ_118744, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  18238

Tables:   1   

This is table  1  of  1  ( 19 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
599--655
29
1.9
30
83
16
75
33
33
3
29
1.75
605--1077
59
9.0
49
76
13
419
34
32
2
31
1.70
731--772
20
2.1
20
86
8
59
35
30
0
33
1.58
764--919
29
5.3
29
73
11
129
33
33
1
30
1.69
656--1103
216
2.1
216
88
3
652
35
31
2
31
1.70
872--1017
50
3.0
49
82
2
195
33
31
1
33
1.67
980--1092
30
3.8
30
76
6
113
34
33
2
29
1.72
1025--1102
30
2.6
30
74
20
74
38
25
3
32
1.74
969--1118
59
2.5
59
83
2
167
34
31
4
30
1.76
3263--3424
28
5.8
28
72
13
129
20
16
27
36
1.93
3282--3478
56
3.5
56
85
2
245
20
17
26
35
1.95
3270--3443
28
6.2
28
69
12
117
21
16
26
35
1.94
3323--3457
28
4.8
28
68
13
98
22
19
25
33
1.97
3475--3554
28
2.9
28
82
0
79
30
8
25
36
1.86
3508--3565
28
2.1
28
83
0
71
31
12
24
32
1.91
6435--6472
17
2.2
17
95
0
67
23
13
13
50
1.76
6453--6522
29
2.4
29
85
0
86
25
10
14
50
1.74
6419--6495
23
3.4
22
74
13
75
24
11
12
50
1.74
7132--7158
4
6.8
4
100
0
54
22
0
0
77
0.76

Tables:   1

The End!