Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01005403.1 Kokia drynarioides strain JFW-HI SEQ_119411, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  26371

Tables:   1   

This is table  1  of  1  ( 35 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
348--759
30
14.0
29
78
7
391
33
3
29
33
1.74
340--755
59
7.0
59
83
4
505
32
3
29
33
1.76
2687--2734
6
8.3
6
84
9
64
52
2
0
45
1.12
2655--2765
17
6.4
17
76
12
100
50
4
1
43
1.33
3234--3425
96
2.0
96
82
8
230
38
13
17
30
1.88
3716--3824
28
3.8
27
73
16
85
37
7
23
31
1.82
3710--3853
58
2.5
57
82
7
173
37
6
23
32
1.80
4279--4349
23
3.1
24
78
9
62
42
0
0
57
0.98
4288--4327
20
2.0
20
90
0
62
40
0
0
60
0.97
4297--4336
3
13.7
3
89
5
64
35
0
0
65
0.93
5030--5102
17
4.1
17
84
5
65
49
2
2
45
1.31
5045--5093
6
8.2
6
77
8
55
53
0
2
44
1.12
5045--5102
19
3.2
18
88
7
82
53
0
1
44
1.10
6702--6768
11
5.9
11
75
19
66
41
1
1
55
1.18
6702--6758
17
3.4
17
87
0
87
42
1
1
54
1.21
6699--6765
23
3.0
23
76
14
68
41
1
1
55
1.18
6702--6765
17
3.7
17
83
10
76
43
1
1
53
1.19
6709--6778
6
12.0
6
75
17
67
45
2
1
50
1.25
7551--7586
12
2.9
12
87
4
54
63
5
0
30
1.17
8531--8618
17
5.0
17
80
10
88
39
2
6
51
1.41
8562--8616
11
4.7
12
77
11
60
43
0
5
50
1.25
8562--8620
23
2.6
23
81
10
59
44
0
5
50
1.24
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
8571--8624
17
3.2
17
82
12
67
51
0
3
44
1.19
8571--8624
18
3.2
16
82
7
63
51
0
3
44
1.19
10517--10929
59
7.1
58
87
6
561
32
33
4
29
1.78
10522--10929
117
3.5
118
86
9
545
32
32
4
29
1.78
10522--10929
176
2.3
175
87
5
601
32
32
4
29
1.78
10522--10923
29
13.8
29
73
16
296
33
31
4
30
1.78
11992--12347
30
11.8
28
73
16
214
36
26
2
34
1.70
12027--12101
38
1.9
38
84
7
98
41
24
4
30
1.73
11998--12309
59
5.0
68
73
15
203
38
26
2
33
1.70
12055--12347
59
4.9
59
79
5
313
37
26
1
34
1.67
12055--12319
30
8.9
29
80
8
266
38
26
1
33
1.66
14536--14577
20
2.1
20
95
0
75
16
19
9
54
1.69
17357--17430
33
2.2
33
100
0
148
8
16
28
47
1.75

Tables:   1

The End!