Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01005756.1 Kokia drynarioides strain JFW-HI SEQ_120010, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  33403

Tables:   1   

This is table  1  of  1  ( 17 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
680--798
63
1.9
63
84
6
161
28
11
21
37
1.89
5566--5687
63
1.9
63
85
3
165
27
10
24
36
1.89
8965--9407
195
2.3
195
80
3
464
29
18
25
26
1.98
13323--13664
80
4.3
79
83
2
380
34
24
17
23
1.96
13323--13685
160
2.3
159
83
3
451
33
25
17
23
1.96
19554--19681
63
2.0
63
100
0
256
25
15
25
33
1.95
19621--19755
52
2.6
52
89
0
189
25
12
25
35
1.92
21382--21425
20
2.2
20
84
8
54
13
6
13
65
1.44
21408--21458
26
1.9
27
88
11
79
5
3
17
72
1.20
21390--21514
12
10.8
12
71
12
84
10
4
16
68
1.33
21363--21512
67
2.2
68
81
8
164
9
4
18
67
1.36
21402--21528
56
2.3
56
75
8
125
11
3
16
69
1.30
21430--21478
21
2.4
20
82
3
53
6
2
20
71
1.18
21399--21528
44
2.9
44
79
8
129
11
3
16
68
1.34
23308--23585
148
1.9
149
83
6
366
29
9
18
42
1.82
33137--33177
11
3.9
11
78
12
50
80
0
19
0
0.71
33137--33176
20
2.0
20
90
0
62
80
0
20
0
0.72

Tables:   1

The End!