Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01005865.1 Kokia drynarioides strain JFW-HI SEQ_120186, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  52199

Tables:   1   

This is table  1  of  1  ( 28 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2026--2055
6
4.8
6
95
4
51
80
0
0
20
0.72
9503--9549
22
2.2
22
88
3
69
74
4
8
12
1.19
9503--9562
22
2.8
21
85
7
68
73
3
10
13
1.21
9529--9558
15
1.9
16
93
6
53
70
0
13
16
1.18
10326--10402
30
2.7
29
78
9
86
62
3
1
32
1.22
11094--11131
20
1.9
20
100
0
76
63
5
2
28
1.30
11155--11254
35
3.1
31
82
12
121
56
5
8
31
1.50
12727--12772
6
8.0
6
80
9
51
28
17
2
52
1.56
12723--12775
17
3.2
16
78
7
54
26
15
1
56
1.49
12723--12775
28
1.9
27
92
3
88
26
15
1
56
1.49
12750--12806
17
3.2
17
80
11
53
38
10
1
49
1.48
12893--12930
16
2.4
16
86
4
51
31
5
5
57
1.43
13032--13076
18
2.6
17
80
19
58
31
11
0
57
1.33
13019--13113
12
7.6
12
70
15
59
34
9
2
53
1.45
13101--13152
19
2.7
19
85
5
52
38
9
1
50
1.46
13123--13194
35
2.1
35
97
0
135
37
11
2
48
1.53
13107--13187
19
4.5
19
76
16
73
39
9
2
48
1.50
13206--13249
17
2.6
17
92
0
70
31
15
0
52
1.44
13287--13321
18
2.0
18
88
5
54
34
14
0
51
1.42
13301--13354
22
2.5
22
90
0
90
31
11
1
55
1.45
16581--16623
18
2.4
18
80
7
52
32
2
2
62
1.20
17357--17522
59
2.9
57
80
4
181
30
12
15
41
1.84
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
17556--17688
60
2.2
58
80
5
140
37
8
20
33
1.82
22183--22228
17
2.7
18
74
12
53
30
4
0
65
1.12
33113--33164
22
2.3
23
86
6
79
11
23
25
40
1.88
37775--37830
22
2.5
22
79
5
58
12
19
23
44
1.84
43644--43694
21
2.5
20
81
15
52
47
1
1
49
1.24
52175--52199
2
12.5
2
100
0
50
52
0
0
48
1.00

Tables:   1

The End!