Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01005949.1 Kokia drynarioides strain JFW-HI SEQ_120338, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  60265

Tables:   1   

This is table  1  of  1  ( 20 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2343--2404
32
1.9
32
90
0
97
33
1
3
61
1.22
4840--4873
17
2.0
17
88
0
50
23
5
5
64
1.38
8381--8443
18
3.5
18
80
4
65
52
14
7
25
1.68
8381--8454
18
4.2
18
77
8
62
50
16
6
27
1.70
15621--16813
298
4.0
297
93
0
2032
29
11
21
38
1.88
19064--19098
12
2.9
12
91
0
52
17
5
0
77
0.96
19064--19098
17
2.1
17
89
10
54
17
5
0
77
0.96
19348--19417
31
2.2
32
87
7
99
48
14
2
34
1.58
23359--23436
26
3.0
26
83
3
86
21
28
16
33
1.95
23567--23666
24
4.2
24
84
0
101
22
26
17
35
1.95
24742--24882
71
2.0
71
98
0
273
40
16
10
32
1.83
25944--25983
18
2.2
18
90
0
62
10
5
2
82
0.91
30957--30981
13
1.9
13
100
0
50
84
0
16
0
0.63
39133--39486
181
2.0
181
89
1
548
39
16
14
29
1.88
42476--42530
26
2.1
26
100
0
110
29
32
10
27
1.91
47462--47528
17
3.9
17
80
7
82
49
10
20
19
1.77
47956--47995
21
1.9
21
85
10
55
0
35
7
57
1.27
49739--49763
6
4.2
6
100
0
50
84
16
0
0
0.63
53592--53635
18
2.4
18
84
0
52
27
15
20
36
1.93
60135--60184
18
2.5
20
87
9
68
44
4
14
38
1.63

Tables:   1

The End!