Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01006379.1 Kokia drynarioides strain JFW-HI SEQ_120956, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  45843

Tables:   1   

This is table  1  of  1  ( 22 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3502--3532
15
2.1
15
93
0
53
70
0
0
29
0.87
3627--3678
20
2.6
20
80
17
63
67
1
1
28
1.12
3627--3669
10
4.6
9
82
5
50
67
2
2
27
1.15
3749--3784
18
2.1
17
89
5
54
47
5
0
47
1.25
5015--5062
9
5.2
9
80
14
62
50
0
0
50
1.00
5007--5097
20
4.6
19
73
20
80
48
0
1
50
1.08
5016--5072
28
2.0
28
100
0
114
49
0
0
50
1.00
5015--5093
40
2.1
37
88
7
113
48
0
0
51
1.00
6001--6042
20
2.2
19
91
4
66
47
0
0
52
1.00
6010--6068
9
7.1
9
69
30
51
47
0
0
52
1.00
6033--6072
20
2.0
20
85
9
55
55
0
0
45
0.99
14311--14430
61
2.0
62
83
8
156
29
20
14
36
1.91
14443--14471
2
14.5
2
100
0
58
48
0
0
51
1.00
14920--15358
121
3.7
115
79
8
420
35
17
18
28
1.94
14920--15311
60
6.6
59
74
14
308
34
16
17
31
1.92
15125--15368
117
2.1
113
76
13
244
33
16
17
32
1.92
17259--17302
6
7.3
6
100
0
88
0
15
47
36
1.46
21765--21824
32
1.9
31
89
3
93
60
0
0
40
0.97
31320--31368
12
4.3
12
77
15
59
71
20
2
6
1.18
31374--31456
19
4.3
19
83
6
103
67
19
7
6
1.36
31391--31447
21
2.8
21
84
5
73
70
19
5
5
1.26
36378--36453
31
2.5
30
83
6
91
43
11
13
31
1.80

Tables:   1

The End!