Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01006567.1 Kokia drynarioides strain JFW-HI SEQ_121153, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  21259

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1134--1182
20
2.5
20
90
6
73
32
8
18
40
1.80
2863--2959
39
2.5
40
81
10
119
34
11
13
41
1.80
5484--5726
49
4.9
49
72
4
182
19
26
17
36
1.94
5498--5726
99
2.3
99
81
4
282
20
27
16
36
1.94
5460--5723
50
5.3
49
73
4
174
20
27
16
35
1.94
10254--10287
10
3.3
10
84
8
50
76
11
0
11
1.02
10534--10558
12
2.1
12
100
0
50
72
0
8
20
1.10
11336--11606
30
9.1
29
83
6
312
37
23
1
38
1.62
11337--11602
59
4.5
60
83
3
297
38
22
1
38
1.62
11337--11603
89
3.0
90
87
3
344
38
22
1
38
1.62
16654--16685
15
2.1
16
94
5
57
84
0
15
0
0.63
17696--18360
49
13.6
49
70
13
327
37
17
24
20
1.93
17713--18363
98
6.7
98
86
1
842
37
16
25
19
1.93
20752--21133
30
12.9
30
83
6
406
34
24
1
39
1.64

Tables:   1

The End!