Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01006840.1 Kokia drynarioides strain JFW-HI SEQ_121439, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  86708

Tables:   1   

This is table  1  of  1  ( 27 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3678--3717
19
2.0
20
95
4
73
20
62
2
15
1.43
6007--6095
45
2.0
45
84
4
117
33
19
17
29
1.95
7750--7801
21
2.6
19
72
18
52
59
1
1
36
1.19
7891--7935
13
3.3
13
84
9
63
55
0
6
37
1.26
7892--7935
14
3.1
14
84
12
63
56
0
6
36
1.26
14297--14331
17
2.1
17
89
10
54
62
0
0
37
0.95
14297--14341
19
2.5
17
82
10
54
68
0
0
31
0.89
15244--15296
27
2.0
27
88
0
79
35
15
9
39
1.79
23056--23115
18
3.3
18
83
6
68
38
0
1
60
1.07
23696--23752
28
2.2
25
77
19
64
29
10
12
47
1.74
23705--23762
28
2.1
28
96
0
107
27
12
13
46
1.79
23780--23871
30
3.0
30
68
18
73
45
2
15
36
1.58
27517--27552
7
5.1
7
100
0
72
69
0
0
30
0.89
29161--29204
22
2.0
22
83
16
56
59
0
0
40
0.98
30175--30206
12
2.6
13
85
14
50
46
0
3
50
1.17
33024--33423
117
3.4
117
89
0
602
27
8
28
36
1.86
35127--35200
24
3.0
24
78
11
78
60
2
5
31
1.33
35136--35200
24
2.6
25
82
2
87
61
3
6
29
1.35
46618--46682
31
2.1
32
83
13
82
36
1
6
55
1.34
48357--48391
18
1.9
18
88
0
52
5
48
0
45
1.26
49161--49210
25
2.0
25
92
0
82
60
12
12
16
1.60
53224--53312
31
3.0
29
81
5
88
48
8
5
37
1.58
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
56378--56421
5
9.4
5
88
11
67
86
13
0
0
0.57
56378--56421
9
4.7
10
86
13
67
86
13
0
0
0.57
56378--56421
14
3.1
14
100
0
88
86
13
0
0
0.57
65277--65372
47
2.0
47
97
0
183
25
19
17
37
1.94
73645--73677
14
2.4
14
90
5
50
57
0
0
42
0.98

Tables:   1

The End!