Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01008228.1 Kokia drynarioides strain JFW-HI SEQ_122892, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  49836

Tables:   1   

This is table  1  of  1  ( 19 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
8500--8556
23
2.4
23
80
8
71
38
7
14
40
1.73
8701--8737
19
2.0
19
94
5
67
56
5
0
37
1.22
8689--8737
19
2.7
18
84
12
64
55
4
0
40
1.19
16226--16266
15
2.9
15
75
24
52
36
17
7
39
1.77
16593--16875
85
3.4
82
71
15
211
44
13
12
29
1.80
16631--16892
84
3.1
81
72
14
217
45
13
11
29
1.79
17077--17185
50
2.1
53
81
8
136
55
8
0
34
1.36
21927--21952
9
2.9
9
100
0
52
11
11
11
65
1.48
26717--26984
85
3.2
83
69
11
204
42
12
12
32
1.81
31533--31639
38
2.8
37
83
5
124
25
24
20
29
1.99
31530--31639
19
5.8
19
74
0
112
25
23
20
30
1.98
35238--35354
52
2.3
52
77
5
130
53
9
3
33
1.50
35769--35830
33
1.9
33
87
6
92
53
11
9
25
1.67
35786--35830
15
2.7
18
73
20
60
53
8
11
26
1.65
37067--37157
30
3.1
28
83
7
119
29
25
18
26
1.98
40932--41257
83
3.9
82
74
9
223
44
11
11
31
1.77
41440--41557
51
2.3
52
72
7
123
55
7
3
33
1.45
42675--42941
84
3.2
84
76
9
240
46
13
9
29
1.75
44317--44500
94
2.0
94
84
2
244
30
28
14
26
1.95

Tables:   1

The End!