Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01008310.1 Kokia drynarioides strain JFW-HI SEQ_122975, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  149866

Tables:   1   

This is table  1  of  1  ( 41 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3157--3210
26
2.1
26
100
0
108
59
3
3
33
1.33
5642--5765
62
2.0
62
93
0
212
26
20
14
38
1.91
9755--9826
35
2.1
35
100
0
144
25
16
13
44
1.85
17761--17810
6
8.5
6
80
12
59
82
0
16
2
0.77
17755--17809
10
5.4
10
79
14
51
83
0
14
1
0.73
17761--17809
18
2.7
19
84
9
68
83
0
14
2
0.73
20165--20216
21
2.5
21
81
6
61
30
26
13
28
1.94
30046--30078
15
2.3
15
89
5
50
21
12
6
60
1.53
32346--32385
18
2.3
18
86
4
55
20
17
10
52
1.72
33989--34079
45
2.0
45
100
0
182
34
8
10
46
1.70
47550--47606
3
19.0
3
76
20
57
68
0
29
1
1.00
47550--47606
21
2.5
23
81
13
66
68
0
29
1
1.00
47550--47603
18
3.1
17
89
5
72
68
0
29
1
1.00
49152--49217
25
2.6
25
87
0
96
18
16
27
37
1.92
59456--59492
18
2.0
19
89
5
58
59
5
0
35
1.20
59469--59569
38
2.6
38
80
15
93
59
4
0
34
1.26
59469--59569
39
2.6
39
80
12
100
59
4
0
34
1.26
59835--59877
22
2.0
22
85
0
59
23
11
9
55
1.64
59907--59971
30
2.2
30
88
0
94
24
4
12
58
1.53
60699--60752
19
2.7
20
82
8
65
18
14
12
53
1.72
63071--63116
17
2.7
16
83
10
56
73
6
0
19
1.04
63069--63107
14
2.6
16
80
19
57
71
7
0
20
1.10
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
73925--73963
20
1.9
19
85
10
51
10
12
7
69
1.37
76863--76921
31
1.9
30
83
16
77
77
0
18
3
0.90
76869--76923
24
2.2
25
81
18
71
76
0
18
5
0.97
97045--97176
50
2.7
50
73
8
117
21
21
13
43
1.87
97042--97569
100
5.3
98
77
5
316
25
19
16
38
1.92
97040--97569
99
5.3
100
78
4
475
25
19
16
38
1.92
97134--97600
50
9.4
50
70
7
272
25
18
18
37
1.93
105883--106070
52
3.6
52
79
4
191
33
23
15
27
1.95
112753--112997
52
4.7
52
72
6
172
31
22
15
30
1.95
116681--116728
25
1.9
25
87
8
71
25
4
4
66
1.27
119107--119153
23
2.0
23
95
0
85
27
12
10
48
1.74
127632--128086
194
2.3
194
84
3
578
30
18
25
25
1.98
130097--130159
27
2.5
25
80
12
74
66
1
7
23
1.27
133612--133637
2
13.0
2
100
0
52
50
0
0
50
1.00
135074--135142
26
2.7
26
79
0
93
24
15
20
39
1.92
137281--137700
198
2.1
198
89
0
626
32
15
12
39
1.85
138963--139009
22
2.1
22
84
11
60
23
10
10
55
1.65
139827--139888
22
2.8
22
92
0
97
19
35
16
29
1.93
139827--139902
22
3.5
22
85
3
73
19
36
15
27
1.93

Tables:   1

The End!