Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01008759.1 Kokia drynarioides strain JFW-HI SEQ_123442, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  78620

Tables:   1   

This is table  1  of  1  ( 24 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1415--1467
20
2.6
21
82
5
74
18
5
35
39
1.75
2043--2107
29
2.6
24
72
25
62
27
1
9
61
1.35
2043--2099
29
2.0
29
92
0
96
29
1
10
57
1.42
4742--4803
22
2.9
22
82
4
72
4
3
20
70
1.19
4788--4826
20
2.0
20
84
0
51
7
0
17
74
1.05
4797--4862
20
3.2
20
82
10
62
7
0
18
74
1.05
4826--4884
12
5.0
12
79
4
75
5
3
20
71
1.20
4767--4884
23
5.1
23
78
10
107
6
2
19
71
1.21
5018--5085
26
2.5
28
75
20
72
26
0
7
66
1.18
5019--5102
29
3.0
27
80
13
82
26
0
8
65
1.21
7680--7718
15
2.4
16
87
8
53
35
0
0
64
0.94
14606--14642
2
18.5
2
94
0
65
0
45
0
54
1.00
22556--22605
16
3.2
16
73
21
52
34
0
6
60
1.21
23083--23125
21
2.1
21
91
4
70
60
13
0
25
1.34
23283--23307
12
2.1
12
100
0
50
52
0
0
48
1.00
25203--25255
27
2.0
26
85
10
72
39
1
0
58
1.09
26462--26511
26
1.9
26
87
0
73
52
18
14
16
1.76
26466--26648
57
3.2
57
76
6
176
45
16
18
19
1.85
26656--26728
33
2.2
33
95
0
128
38
8
5
47
1.56
34213--34248
14
2.5
14
95
4
63
33
5
2
58
1.36
36033--36589
282
2.0
282
86
2
780
31
10
16
41
1.82
51387--51422
18
2.1
17
89
5
54
22
0
44
33
1.53
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
70233--70357
62
2.0
62
100
0
250
38
11
13
36
1.81
70472--70524
26
2.1
26
83
13
67
32
1
18
47
1.60

Tables:   1

The End!