Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01008969.1 Kokia drynarioides strain JFW-HI SEQ_123666, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  95005

Tables:   1   

This is table  1  of  1  ( 26 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3282--3334
27
2.0
27
92
0
88
20
11
62
5
1.49
3271--3343
22
3.3
22
81
9
78
23
10
58
6
1.55
3285--3347
27
2.3
27
83
5
74
25
12
55
6
1.60
13722--13759
16
2.4
16
86
8
51
26
0
0
73
0.83
25099--25163
30
2.1
29
78
15
69
53
4
0
41
1.21
34515--34545
16
1.9
16
93
0
53
48
38
6
6
1.55
46517--46570
23
2.4
24
75
12
60
55
0
0
44
0.99
46555--46620
29
2.3
28
80
15
73
42
4
3
50
1.38
46841--46886
23
2.0
23
95
0
83
32
28
4
34
1.77
50252--50291
3
13.3
3
100
0
80
67
0
0
32
0.91
53423--53468
24
1.9
24
82
8
58
47
4
2
45
1.34
53949--53979
15
2.1
15
93
0
53
41
0
0
58
0.98
54285--54346
20
3.2
20
84
9
74
56
3
0
40
1.15
58677--58941
68
3.9
68
85
2
343
26
21
18
33
1.97
60303--60619
157
2.0
158
95
1
575
41
11
7
39
1.70
62831--62871
17
2.3
18
88
12
59
51
0
0
48
1.00
62821--62869
16
3.1
15
81
16
55
55
0
0
44
0.99
64970--64994
13
1.9
13
100
0
50
28
32
8
32
1.86
76836--76916
40
2.0
40
100
0
162
27
24
7
40
1.81
83084--83110
8
3.4
8
100
0
54
77
0
0
22
0.76
84600--84638
10
3.8
10
83
6
51
41
0
0
58
0.98
86400--86506
52
2.1
52
96
0
196
26
15
9
48
1.75
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
88499--88559
24
2.5
24
86
0
86
26
13
9
50
1.72
88692--88736
24
1.9
23
86
4
63
11
2
26
60
1.42
92245--92289
22
2.0
22
84
16
58
42
0
24
33
1.55
92959--93214
123
2.1
123
100
0
512
34
26
18
20
1.96

Tables:   1

The End!