Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01009333.1 Kokia drynarioides strain JFW-HI SEQ_124040, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  38959

Tables:   1   

This is table  1  of  1  ( 32 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
357--401
20
2.2
20
92
0
72
37
2
35
24
1.68
5272--5315
12
3.8
12
77
22
58
22
9
34
34
1.86
8447--8560
46
2.5
46
86
0
147
28
15
26
29
1.96
10063--10242
53
3.4
53
76
8
181
36
21
14
28
1.92
10560--10987
212
2.0
212
93
0
730
35
28
4
31
1.78
11271--11296
2
13.0
2
100
0
52
50
0
0
50
1.00
13084--13108
13
1.9
13
100
0
50
64
0
4
32
1.12
13061--13108
18
2.7
18
83
0
60
66
2
4
27
1.21
13070--13136
18
3.9
18
75
12
61
67
4
2
25
1.24
13294--13335
20
2.0
21
90
4
68
66
4
2
26
1.23
13541--13578
15
2.5
15
84
12
51
76
5
2
15
1.08
13785--13865
25
3.1
27
75
18
82
40
12
8
38
1.74
14269--15106
43
19.1
43
81
4
782
26
14
25
34
1.94
14269--15106
88
9.6
87
82
4
808
26
14
25
34
1.94
14384--15104
174
4.1
172
81
5
727
26
13
25
34
1.93
14269--15106
217
3.8
218
83
4
918
26
14
25
34
1.94
16110--16200
1
91.0
1
68
0
56
0
15
0
84
0.62
16108--16204
6
16.8
6
81
14
100
0
16
0
83
0.65
16110--16204
22
4.4
22
85
10
117
0
15
0
84
0.63
16112--16200
28
3.1
29
84
12
114
0
15
0
84
0.63
16108--16204
33
2.8
34
86
10
117
0
16
0
83
0.65
16111--16204
14
6.2
14
78
20
84
0
15
0
84
0.63
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
25134--25193
6
9.3
6
74
25
52
76
5
1
16
1.04
25048--25193
26
5.5
26
69
16
79
71
5
4
18
1.21
25210--25267
19
2.9
19
71
5
53
68
6
3
20
1.27
25210--25250
15
2.7
16
85
7
50
73
7
2
17
1.17
26044--26068
13
1.9
13
100
0
50
36
8
24
32
1.84
26552--26623
37
1.9
37
83
10
94
43
0
2
54
1.15
26611--26674
29
2.1
32
80
13
73
43
4
6
45
1.50
32409--32466
23
2.6
22
83
2
71
20
18
32
27
1.97
32411--32465
22
2.4
23
84
3
67
21
20
30
27
1.98
38364--38888
154
3.4
153
89
6
776
42
11
4
42
1.61

Tables:   1

The End!