Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01009469.1 Kokia drynarioides strain JFW-HI SEQ_124177, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  332091

Tables:   1   2   

This is table  2  of  2  ( 150 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
262992--263073
29
2.8
29
81
7
94
32
13
25
28
1.93
263022--263260
29
8.2
30
75
12
185
31
7
26
34
1.84
263022--263198
56
3.1
59
74
10
177
30
9
26
33
1.88
263008--263197
85
2.2
87
87
1
276
32
9
26
31
1.88
263035--263484
58
7.7
58
73
13
264
34
4
26
34
1.78
263070--263484
29
14.2
29
71
13
203
34
4
26
35
1.75
263253--263425
61
2.9
61
80
7
169
34
3
25
36
1.73
264414--264455
3
14.0
3
84
0
57
40
0
0
59
0.97
265111--265186
11
6.7
11
69
19
50
51
3
1
43
1.28
265111--265190
6
14.0
6
70
15
62
52
3
1
42
1.27
265129--265237
17
6.7
17
72
15
79
55
5
0
38
1.30
268832--268861
15
2.0
15
93
0
51
36
0
0
63
0.95
269224--269274
21
2.4
22
77
9
61
60
3
0
35
1.15
289522--289599
18
4.3
19
69
18
58
60
0
0
39
0.97
289812--289836
7
3.6
7
100
0
50
12
0
12
76
1.04
306518--306553
17
2.1
17
89
0
54
38
0
2
58
1.13
307239--307272
13
2.6
13
85
0
50
26
5
0
67
1.13
308347--308839
29
16.9
28
72
13
295
37
24
2
35
1.69
308352--308805
59
7.8
57
78
11
354
37
23
1
36
1.67
308748--308799
27
1.9
27
88
7
79
40
25
3
30
1.73
308789--308855
30
2.3
28
82
10
82
32
26
7
32
1.84
312389--312414
11
2.4
11
100
0
52
38
0
7
53
1.30
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
314986--315054
31
2.3
29
79
13
79
46
4
1
47
1.31
314986--315056
30
2.4
28
78
15
81
46
4
1
47
1.30
315812--315857
2
23.0
2
95
0
83
50
2
47
0
1.13
319832--319905
26
2.9
26
74
4
71
48
10
2
37
1.52
319833--319882
26
1.9
26
87
0
73
48
10
4
38
1.56
319892--319936
15
3.1
14
83
6
54
48
0
0
51
1.00
319905--319935
14
2.2
14
100
0
62
51
0
0
48
1.00
327589--327638
23
2.2
23
80
20
61
34
2
2
62
1.18

Tables:   1   2

The End!