Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01009565.1 Kokia drynarioides strain JFW-HI SEQ_124278, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  145433

Tables:   1   

This is table  1  of  1  ( 42 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--182
93
2.0
93
98
0
355
17
7
42
32
1.78
820--861
14
2.9
15
79
13
52
35
9
0
54
1.33
1800--1856
24
2.2
26
75
12
64
36
7
1
54
1.38
2722--2779
30
1.9
31
82
10
75
51
6
5
36
1.51
3587--3669
36
2.2
38
89
6
125
36
4
6
53
1.47
4232--4369
74
1.9
74
82
8
174
46
15
12
26
1.81
7280--7332
18
2.9
18
78
13
63
60
1
3
33
1.26
13089--13122
12
2.8
12
95
0
59
79
0
8
11
0.94
14405--14456
12
4.3
12
75
7
52
69
17
5
7
1.33
14441--14510
22
3.4
22
73
16
78
71
14
4
10
1.27
14418--14524
40
2.5
42
82
11
128
68
18
5
7
1.34
18836--18881
24
1.9
24
95
0
83
50
4
28
17
1.65
34498--34558
31
2.0
31
84
15
83
62
4
0
32
1.17
40767--40794
2
14.0
2
100
0
56
50
0
0
50
1.00
41262--41295
9
4.0
8
85
14
50
26
0
0
73
0.83
45450--45503
27
2.1
27
82
6
67
48
1
3
46
1.30
46954--46978
2
12.5
2
100
0
50
0
48
0
52
1.00
46978--47006
2
14.5
2
100
0
58
48
0
0
51
1.00
49014--49082
31
2.2
31
87
5
95
37
13
7
42
1.71
55909--56135
113
2.0
113
97
0
427
36
23
16
23
1.94
57138--57748
305
2.0
305
99
0
1213
24
24
15
36
1.93
66978--67042
31
2.1
30
85
2
85
50
1
1
46
1.20
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
72283--72653
29
12.8
29
71
18
249
31
4
30
33
1.77
72283--72654
59
6.4
58
81
6
434
31
4
30
34
1.77
72283--72648
116
3.2
116
84
5
458
31
4
30
33
1.77
74419--74462
6
7.7
6
82
10
56
50
0
2
47
1.13
74417--74466
22
2.3
21
86
10
73
52
0
2
46
1.12
74428--74464
16
2.2
16
90
4
56
48
0
2
48
1.15
91686--91741
29
2.0
28
89
10
87
33
0
16
50
1.45
96584--96894
153
2.0
153
96
0
568
25
11
15
47
1.79
103512--103592
39
2.1
39
97
0
153
19
8
35
35
1.83
108253--108304
27
2.0
26
84
3
68
28
17
0
53
1.44
108354--108399
21
2.2
21
84
7
58
41
4
0
54
1.20
110696--110747
21
2.5
21
81
6
61
21
23
17
38
1.93
119437--119488
23
2.1
24
89
10
79
46
11
7
34
1.69
125332--125394
31
2.0
31
81
0
72
36
15
9
38
1.81
127886--127940
26
2.1
26
90
6
85
54
0
0
45
0.99
130420--130470
23
2.1
25
85
7
70
37
0
3
58
1.16
130411--130464
20
2.8
18
76
13
54
27
0
1
70
0.98
131275--131397
61
2.0
61
98
0
237
30
8
21
39
1.84
134400--134449
15
3.3
15
88
0
73
2
20
2
76
0.99
139809--140097
146
2.0
146
96
0
533
28
21
16
34
1.95

Tables:   1

The End!