Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01009572.1 Kokia drynarioides strain JFW-HI SEQ_124286, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  58032

Tables:   1   

This is table  1  of  1  ( 23 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1844--1944
36
2.8
36
86
3
141
24
24
12
37
1.91
4492--4543
14
3.6
14
82
10
52
46
5
0
48
1.26
4985--5096
56
2.0
56
98
0
215
47
23
13
16
1.81
5571--5614
2
22.0
2
100
0
88
50
0
0
50
1.00
8978--9035
28
2.1
28
86
0
80
37
31
20
10
1.86
20050--20103
18
3.2
17
72
17
51
22
27
1
48
1.61
20139--20333
99
2.0
99
91
0
318
22
30
8
37
1.85
20928--21006
29
2.7
30
90
7
119
48
1
0
50
1.08
22147--22216
31
2.2
31
90
7
106
15
30
0
54
1.42
23634--23745
48
2.3
48
81
3
127
28
19
9
41
1.83
24526--24581
16
3.5
16
82
0
67
44
5
19
30
1.73
24758--24890
61
2.2
63
82
9
168
48
3
2
45
1.30
25408--25477
30
2.3
30
87
0
104
47
18
2
31
1.63
28038--28233
98
2.0
98
95
0
356
28
16
9
45
1.79
29320--29516
97
2.0
97
99
0
385
24
20
25
29
1.99
30122--30290
88
1.9
87
90
1
266
47
11
9
31
1.72
33330--33404
7
10.7
7
81
5
71
26
0
29
44
1.55
33325--33400
28
2.7
28
87
4
100
26
0
30
43
1.55
33330--33404
35
2.1
35
92
0
123
26
0
29
44
1.55
33325--33414
21
4.3
21
72
10
85
25
0
30
44
1.54
39737--39768
16
1.9
17
93
6
57
68
0
0
31
0.90
48060--48135
12
6.4
12
75
7
75
72
11
2
13
1.23
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
48060--48135
23
3.2
23
78
10
82
72
11
2
13
1.23

Tables:   1

The End!