Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01009683.1 Kokia drynarioides strain JFW-HI SEQ_124401, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  84036

Tables:   1   

This is table  1  of  1  ( 26 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1050--1087
20
1.9
20
84
10
51
73
5
2
18
1.14
6188--6233
25
1.9
23
86
8
65
36
4
4
54
1.40
12601--12636
13
2.6
14
86
8
56
47
25
0
27
1.52
16258--16340
17
5.2
15
72
16
60
8
26
3
61
1.41
16881--16912
16
2.1
16
88
11
50
50
6
21
21
1.71
18387--18412
3
8.7
3
100
0
52
69
0
0
30
0.89
18782--18824
11
3.8
11
80
17
52
32
0
2
65
1.06
18785--18828
23
1.9
23
90
0
70
34
0
4
61
1.16
23149--23186
15
2.5
16
83
12
53
15
26
13
44
1.83
23718--23751
14
2.5
14
90
4
52
29
8
11
50
1.69
24607--24779
95
1.8
93
82
9
224
26
13
2
57
1.49
27090--27157
27
2.5
27
81
11
68
36
2
1
58
1.22
27120--27162
11
3.8
11
80
17
52
32
2
0
65
1.06
29622--29905
72
3.9
72
95
0
505
31
25
10
32
1.89
31704--31728
13
1.9
13
100
0
50
48
16
4
32
1.64
31775--31806
15
2.1
15
94
0
55
56
15
3
25
1.54
31840--31899
4
15.0
4
89
6
95
51
23
0
25
1.48
32474--32526
23
2.5
20
80
17
61
64
1
0
33
1.05
32478--32526
10
4.5
10
82
12
53
63
2
0
34
1.06
32749--32792
2
22.0
2
90
9
72
50
0
47
2
1.13
34307--34363
19
3.1
19
82
7
64
57
7
0
35
1.26
39525--39823
80
3.7
80
83
2
361
32
26
19
22
1.97
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
45310--45528
111
2.0
112
95
0
395
38
12
28
21
1.89
51829--51867
15
2.5
16
83
4
53
30
2
12
53
1.52
69893--69927
17
2.1
17
88
0
52
34
11
2
51
1.53
77555--77585
16
1.9
16
93
0
53
58
9
3
29
1.46

Tables:   1

The End!