Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01009759.1 Kokia drynarioides strain JFW-HI SEQ_124478, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  528391

Tables:   1   2   

This is table  2  of  2  ( 156 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
457985--458020
9
4.0
9
89
10
56
66
2
0
30
1.06
461186--461249
25
2.5
25
75
12
67
26
1
4
67
1.19
464892--464927
18
1.9
18
88
5
54
61
5
0
33
1.19
465187--465216
15
1.9
16
93
6
53
46
10
0
43
1.37
465951--466009
22
2.7
22
71
2
57
49
1
1
47
1.21
470224--470285
31
2.0
31
90
0
97
33
16
11
38
1.84
476930--477001
22
3.2
23
75
18
80
5
5
13
75
1.17
476923--477038
44
2.5
45
89
8
164
4
4
17
74
1.15
476953--477059
11
9.5
11
71
15
67
3
2
19
73
1.11
476940--477012
22
3.3
22
78
14
87
5
4
15
75
1.14
476997--477100
23
4.7
22
82
7
95
5
2
22
69
1.23
476924--477087
45
3.6
47
79
10
128
4
4
18
71
1.20
476969--477087
34
3.5
34
76
11
84
5
3
21
70
1.21
484844--485323
135
3.6
132
84
8
584
53
18
7
19
1.68
485614--485644
2
15.5
2
93
0
53
51
3
45
0
1.17
489622--489663
22
1.9
22
85
9
59
45
4
9
40
1.58
492899--492961
30
2.1
30
82
5
74
52
6
0
41
1.27
493161--493211
22
2.3
21
80
6
57
27
49
0
23
1.51
496093--496150
31
1.9
31
86
10
84
39
5
8
46
1.57
497499--498202
263
2.6
263
88
5
1038
29
6
17
46
1.74
506768--506794
4
6.8
4
100
0
54
77
0
0
22
0.76
508174--508710
269
2.0
269
96
0
993
32
14
12
40
1.83
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
511494--511545
2
26.0
2
100
0
104
50
0
0
50
1.00
515479--515541
31
2.0
31
93
6
110
42
12
12
31
1.81
518459--518508
8
6.5
8
76
15
52
26
0
0
74
0.83
518462--518516
25
2.2
25
87
6
76
29
0
1
69
0.99
518937--518991
6
8.0
7
76
15
53
67
1
1
29
1.11
518935--518974
19
2.2
18
86
13
55
72
0
0
27
0.85
518936--518992
20
2.7
23
76
23
70
66
1
1
29
1.12
519070--519102
12
2.6
13
85
9
50
27
0
0
72
0.85
519064--519115
18
2.9
17
75
8
59
34
0
0
65
0.93
521766--521795
16
1.9
16
93
6
53
73
0
10
16
1.09
521803--521838
2
18.0
2
100
0
72
50
0
0
50
1.00
523089--523146
19
2.9
20
82
7
73
48
3
1
46
1.29
527398--527435
2
19.0
2
88
0
58
44
5
0
50
1.24
527395--527435
10
4.1
10
96
0
73
43
7
0
48
1.30

Tables:   1   2

The End!