Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold130
Parameters: 2 7 7 80 10 50 1000
Length:  730134

Tables:   1   2   3   4   5   

This is table  5  of  5  ( 494 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
703925--704224
79
3.8
78
81
7
333
28
26
13
31
1.94
703641--704076
237
1.8
237
82
3
556
29
25
12
33
1.92
703925--704224
158
1.9
158
83
9
398
28
26
13
31
1.94
705629--705660
2
16.0
2
100
0
64
50
0
0
50
1.00
706528--706571
2
22.0
2
100
0
88
50
0
0
50
1.00
707144--707194
3
17.0
3
95
0
93
33
1
0
64
1.05
714952--714989
7
5.6
7
87
12
53
89
0
10
0
0.49
714945--714989
11
4.2
11
83
13
58
86
0
13
0
0.57
714951--714989
20
1.9
21
94
5
71
89
0
10
0
0.48
715872--715926
16
3.4
17
77
7
60
16
20
0
63
1.31
716886--716930
3
15.0
3
95
0
81
64
2
0
33
1.06
722681--722825
51
2.9
50
84
4
193
28
13
11
46
1.78
728997--729036
2
20.5
2
94
5
73
0
50
0
50
1.00
729036--729065
2
15.5
2
93
6
53
46
0
0
53
1.00

Tables:   1   2   3   4   5

The End!