Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold155
Parameters: 2 7 7 80 10 50 1000
Length:  191578

Tables:   1   2   

This is table  2  of  2  ( 146 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
154532--154581
19
2.6
19
77
3
55
54
0
4
42
1.19
154567--154625
26
2.2
26
87
9
82
42
6
15
35
1.73
155664--155728
33
2.0
33
90
6
105
33
15
13
36
1.87
155661--155715
13
4.7
13
68
25
50
34
16
12
36
1.87
155758--155830
20
3.7
20
85
7
87
39
16
13
30
1.87
161789--161820
15
2.1
15
94
0
55
6
18
6
68
1.32
162922--162973
21
2.5
20
84
6
68
50
0
19
30
1.48
168940--169002
33
1.9
33
87
6
92
38
19
9
33
1.84
170594--170668
20
3.7
20
71
13
71
36
13
13
37
1.84
170709--170761
20
2.7
20
96
0
97
43
11
9
35
1.73
171466--171522
28
2.0
29
82
6
71
59
3
1
35
1.25
173631--173669
19
2.1
19
90
0
60
43
0
0
56
0.99
173638--173721
28
3.0
29
86
6
120
42
0
0
57
0.99
173653--173722
33
2.1
34
81
5
79
45
0
0
54
0.99
173710--173739
16
1.9
16
93
6
53
53
0
0
46
1.00
173668--173741
25
3.0
26
71
9
66
48
0
0
51
1.00
173714--173809
30
3.3
29
81
8
97
52
3
3
41
1.33
173714--173809
29
3.3
29
82
8
97
52
3
3
41
1.33
174000--174062
29
2.1
29
82
8
74
47
0
0
52
1.00
174023--174091
17
4.1
16
78
12
75
52
0
0
47
1.00
174090--174150
23
2.7
23
87
5
81
63
1
3
31
1.20
175931--175987
20
2.8
20
82
10
80
31
14
14
40
1.85
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
175951--176083
51
2.6
51
95
0
230
28
15
12
42
1.84
189896--189929
9
3.7
9
88
7
50
88
5
0
5
0.64
191176--191575
28
14.0
28
85
5
534
29
33
16
20
1.95
191176--191575
88
4.7
85
86
5
547
29
33
16
20
1.95

Tables:   1   2

The End!