Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1749
Parameters: 2 7 7 80 10 50 1000
Length:  365996

Tables:   1   2   3   

This is table  3  of  3  ( 256 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
318796--318833
13
3.0
12
88
11
58
31
15
18
34
1.92
325138--325162
13
1.9
13
100
0
50
36
16
16
32
1.90
325120--325185
33
2.0
33
93
0
114
36
18
16
28
1.93
337409--337513
20
4.7
20
70
22
84
40
13
16
30
1.86
339541--339728
58
3.3
57
82
3
200
46
13
11
28
1.79
339512--339725
116
1.9
115
80
7
256
47
13
12
26
1.78
339618--339726
29
3.7
29
68
16
89
49
14
9
26
1.73
339427--339784
58
6.2
57
75
8
183
46
12
13
26
1.79
339829--339891
28
2.2
28
97
0
117
41
11
9
38
1.73
343635--343689
20
2.7
21
88
2
76
29
12
12
45
1.79
343615--343689
21
3.6
21
80
7
73
28
13
14
44
1.83
350169--350339
91
1.9
90
84
6
229
37
14
16
32
1.88
352801--352837
19
2.0
18
89
5
56
8
29
10
51
1.65
355988--356061
21
3.5
22
77
7
80
16
22
1
59
1.44
363655--363823
48
3.5
49
82
6
211
36
13
14
35
1.85
363655--363823
47
3.5
48
83
4
207
36
13
14
35
1.85

Tables:   1   2   3

The End!