Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1927
Parameters: 2 7 7 80 10 50 1000
Length:  302399

Tables:   1   2   3   

This is table  3  of  3  ( 254 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
293969--294044
27
2.8
28
88
6
102
21
21
34
23
1.97
296522--296547
13
2.0
13
100
0
52
38
15
15
30
1.88
296501--296567
33
2.0
33
88
0
98
43
16
14
25
1.86
296587--296654
19
3.9
18
76
23
83
38
14
11
35
1.83
296609--296633
13
1.9
13
100
0
50
32
16
16
36
1.90
296590--296652
32
2.0
32
96
0
117
36
15
12
34
1.86
296710--296765
21
2.7
21
97
0
103
37
19
10
32
1.86
296771--296821
1
51.0
1
94
0
75
3
1
0
94
0.38
296777--296824
24
2.0
24
100
0
96
8
4
0
87
0.66
297417--298259
55
15.3
55
90
5
1289
20
20
30
29
1.97
297677--297764
28
3.2
28
64
20
67
18
18
31
31
1.95
299241--299298
1
58.0
1
82
0
71
0
3
5
91
0.51
299226--299298
10
7.5
10
81
6
71
0
8
4
87
0.65
299241--299298
27
2.1
26
90
9
89
0
3
5
91
0.51

Tables:   1   2   3

The End!