Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold200
Parameters: 2 7 7 80 10 50 1000
Length:  649609

Tables:   1   2   3   4   5   

This is table  5  of  5  ( 492 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
624309--624383
32
2.3
32
100
0
150
34
18
12
34
1.88
624636--632352
476
16.3
476
82
4
8168
35
14
17
31
1.91
633049--636910
475
8.2
473
85
3
4651
35
14
18
31
1.91
633049--636910
951
4.1
950
84
3
4819
35
14
18
31
1.91
637891--637916
13
2.0
13
100
0
52
38
15
15
30
1.88
637873--637937
34
2.0
33
90
6
105
44
13
12
29
1.81
641982--642018
15
2.4
16
82
17
51
51
18
16
13
1.76
644094--644132
13
3.0
13
92
0
69
35
17
15
30
1.91
644243--644288
21
2.2
20
81
11
58
32
19
4
43
1.71
646626--646690
21
3.6
19
73
26
70
44
15
12
27
1.82
646644--646669
13
2.0
13
100
0
52
38
15
15
30
1.88
646626--646690
34
2.0
33
93
6
114
44
15
12
27
1.82

Tables:   1   2   3   4   5

The End!