Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2308
Parameters: 2 7 7 80 10 50 1000
Length:  385994

Tables:   1   2   3   

This is table  3  of  3  ( 259 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
348582--348676
23
3.9
23
73
16
59
31
1
3
64
1.16
348570--348652
30
2.8
32
78
10
77
32
2
3
61
1.26
349384--349583
102
2.0
99
84
4
258
30
23
17
29
1.97
349416--349608
102
1.9
100
79
4
217
32
23
15
28
1.95
350504--350573
35
2.0
35
100
0
140
22
25
14
37
1.92
351568--351629
32
1.9
32
86
0
88
41
3
20
33
1.69
355649--355696
16
2.7
17
81
15
53
43
2
0
54
1.12
360388--360422
18
1.9
18
100
0
70
22
11
11
54
1.68
361436--361460
2
12.5
2
100
0
50
0
0
52
48
1.00
361460--361517
2
29.0
2
100
0
116
50
0
50
0
1.00
365891--365929
17
2.4
16
83
8
51
66
2
0
30
1.05
372767--372809
22
2.0
21
86
4
59
60
6
2
30
1.35
373228--373269
20
2.1
20
86
8
59
47
0
4
47
1.23
375483--375820
119
2.7
130
82
12
381
54
1
2
41
1.23
379571--379623
24
2.3
23
90
6
81
62
0
1
35
1.06
379906--379972
32
2.0
34
82
5
84
43
0
1
55
1.09
380135--380171
18
2.1
18
89
0
56
45
0
0
54
1.00
384732--384761
2
15.0
2
100
0
60
50
0
0
50
1.00
384775--384835
19
3.2
19
68
9
52
42
1
21
34
1.63

Tables:   1   2   3

The End!