Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold245
Parameters: 2 7 7 80 10 50 1000
Length:  333457

Tables:   1   2   3   

This is table  3  of  3  ( 273 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
297260--297316
21
2.8
19
79
12
51
50
1
0
47
1.11
297944--297982
3
13.0
3
100
0
78
0
33
0
66
0.92
300959--301000
19
2.3
18
80
12
50
57
0
0
42
0.99
301263--301299
6
6.2
6
90
0
56
32
0
0
67
0.91
301927--301979
21
2.6
20
82
8
63
66
1
5
26
1.25
302520--302561
18
2.4
18
84
11
52
40
0
0
59
0.97
302527--302563
18
2.0
18
89
5
56
40
0
0
59
0.97
302979--303047
32
2.2
32
82
12
81
43
5
2
47
1.42
304385--304412
14
2.0
14
100
0
56
64
0
0
35
0.94
306641--306740
52
1.9
52
85
4
139
33
12
17
38
1.86
307077--307135
20
2.9
21
82
10
68
47
5
10
37
1.59
308349--308443
25
3.8
24
75
13
82
61
1
4
33
1.22
309012--309043
15
2.1
15
94
0
55
0
9
6
84
0.78
309968--310012
20
2.4
19
88
7
65
35
8
6
48
1.61
309968--310022
20
2.8
20
84
10
62
32
10
7
49
1.65
313510--313544
2
17.5
2
93
0
61
51
0
2
45
1.16
313826--313859
2
17.0
2
100
0
68
50
0
0
50
1.00
314266--314299
2
17.5
2
87
6
52
47
0
2
50
1.16
314832--314877
24
2.0
23
95
4
83
4
13
13
69
1.33
314814--314877
33
1.9
33
87
3
92
7
10
9
71
1.30
319145--319185
21
2.0
21
90
0
64
58
2
0
39
1.11
323171--323589
78
5.4
78
78
4
380
30
13
17
38
1.89
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
323168--323589
156
2.7
155
81
2
477
29
13
18
38
1.89
328253--328289
17
2.1
18
95
5
67
40
29
5
24
1.77
328863--328998
38
3.6
38
89
4
211
29
25
13
32
1.93
328855--328998
76
1.9
76
91
2
236
29
25
12
33
1.92
332009--332054
12
3.8
12
85
0
56
34
0
8
56
1.30
332007--332057
24
2.1
24
92
0
84
33
0
7
58
1.27
332598--332635
15
2.6
14
88
12
58
84
0
13
2
0.73
332597--332636
10
3.9
10
87
6
53
85
0
12
2
0.71
332596--332637
16
2.6
17
81
11
61
85
0
11
2
0.68
332673--332716
20
2.1
22
87
8
65
31
0
0
68
0.90
332672--332722
20
2.6
20
79
11
61
33
0
0
66
0.92

Tables:   1   2   3

The End!