Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2456
Parameters: 2 7 7 80 10 50 1000
Length:  193328

Tables:   1   2   

This is table  2  of  2  ( 138 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
169642--169806
84
2.0
84
82
7
201
24
19
3
52
1.62
173658--173724
37
1.9
35
88
11
102
29
25
11
32
1.92
174181--174206
13
2.0
13
100
0
52
30
15
15
38
1.88
174161--174224
32
2.0
33
90
3
103
28
14
15
42
1.86
174914--174957
21
2.1
21
83
8
54
25
31
4
38
1.76
176122--176146
13
1.9
13
100
0
50
32
16
16
36
1.90
179341--179407
37
1.9
35
88
11
102
29
25
11
32
1.92
179864--179889
13
2.0
13
100
0
52
30
15
15
38
1.88
179844--179907
32
2.0
33
90
3
103
28
14
15
42
1.86
188626--188691
1
66.0
1
75
0
60
87
9
3
0
0.63
188627--188689
18
3.5
17
85
14
83
87
9
3
0
0.65
188626--188691
10
6.8
10
80
11
75
87
9
3
0
0.63
189660--190503
61
14.4
60
85
7
996
25
29
20
24
1.99
189664--190503
232
3.6
231
88
3
1130
25
29
20
24
1.99
191111--191154
14
3.0
16
81
18
60
72
0
0
27
0.85
191256--191350
19
5.7
18
71
27
84
30
12
17
38
1.87
191274--191332
13
4.1
13
76
23
64
30
13
16
38
1.88
191256--191358
32
3.2
32
95
0
179
30
12
18
38
1.88

Tables:   1   2

The End!