Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold296
Parameters: 2 7 7 80 10 50 1000
Length:  679504

Tables:   1   2   3   4   

This is table  4  of  4  ( 375 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
656413--656490
41
1.9
41
97
0
147
28
24
11
35
1.90
657511--657536
13
2.0
13
100
0
52
38
15
15
30
1.88
657493--657556
32
2.0
33
87
3
94
40
17
14
28
1.88
661575--661611
15
2.4
16
82
17
51
51
18
16
13
1.76
663678--663716
13
3.0
13
92
0
69
30
12
17
38
1.88
663837--663882
21
2.2
20
81
11
58
32
19
4
43
1.71
666565--666590
13
2.0
13
100
0
52
30
15
15
38
1.88
666545--666608
32
2.0
33
87
3
94
28
14
17
40
1.88
667298--667341
21
2.1
21
83
8
54
25
31
4
38
1.76
667333--667382
25
2.0
25
96
0
91
50
6
4
40
1.46
669171--669208
13
2.9
13
100
0
76
36
15
15
31
1.90
671268--671298
15
2.1
15
93
0
53
12
22
16
48
1.80
673102--673146
21
2.1
21
84
8
56
22
20
4
53
1.63
673738--673762
12
2.1
12
100
0
50
32
36
0
32
1.58
675361--675386
13
2.0
13
100
0
52
30
15
15
38
1.88

Tables:   1   2   3   4

The End!