Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold316
Parameters: 2 7 7 80 10 50 1000
Length:  597962

Tables:   1   2   3   4   5   

This is table  5  of  5  ( 496 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
577507--577552
23
2.0
23
83
12
58
36
0
0
63
0.95
577520--577578
17
3.5
17
77
11
68
40
0
0
59
0.97
578156--578202
15
3.1
16
76
20
55
36
0
0
63
0.94
578457--578522
13
4.1
18
78
21
67
40
0
0
59
0.98
578458--578512
28
2.0
28
82
13
69
36
0
0
63
0.95
578664--578689
4
6.5
4
100
0
52
76
0
0
23
0.78
578924--578978
26
2.2
26
83
6
69
41
0
0
58
0.98
580824--580854
2
15.5
2
100
0
62
51
48
0
0
1.00
584354--584430
20
3.8
20
69
17
61
58
0
0
41
0.98
585245--585285
8
5.2
8
80
13
50
31
0
0
68
0.90
585250--585283
17
2.0
17
94
0
59
26
0
0
73
0.83
585245--585294
25
2.0
25
85
14
68
28
0
2
70
0.99
586176--586240
29
2.3
29
82
10
82
52
7
0
40
1.30
588828--588865
14
2.6
14
91
4
58
55
5
2
36
1.37
593051--593099
25
2.0
25
95
0
89
14
16
12
57
1.66
597892--597962
29
2.6
27
91
8
124
11
18
8
61
1.53

Tables:   1   2   3   4   5

The End!