Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold321
Parameters: 2 7 7 80 10 50 1000
Length:  1060354

Tables:   1   2   3   4   5   6   

This is table  6  of  6  ( 625 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1013677--1013719
13
3.2
13
80
9
50
72
0
20
6
1.08
1013837--1013896
23
2.6
22
74
7
57
25
3
3
68
1.20
1014727--1014784
25
2.3
25
80
13
66
34
3
0
62
1.12
1014712--1014772
31
2.0
30
84
12
81
31
1
0
67
1.01
1015320--1015378
23
2.7
23
84
5
77
47
0
0
52
1.00
1015320--1015392
23
3.0
25
80
9
71
47
0
0
52
1.00
1015325--1015408
26
3.2
26
77
9
82
51
0
0
48
1.00
1022924--1022948
13
1.9
13
100
0
50
8
20
24
48
1.76
1030231--1030274
2
22.0
2
95
0
79
0
47
0
52
1.00
1034908--1034939
2
16.0
2
100
0
64
50
0
0
50
1.00
1035801--1035852
22
2.4
23
81
12
65
48
0
0
51
1.00
1036502--1036636
65
2.1
63
80
13
143
52
0
2
44
1.18
1037122--1037146
13
1.9
13
100
0
50
12
0
0
88
0.53
1040425--1040494
22
3.2
22
82
10
81
51
0
1
47
1.09
1040419--1040500
22
3.6
22
77
11
67
52
0
1
46
1.08
1044213--1044440
112
2.0
112
98
0
438
25
14
19
40
1.89
1051897--1051925
2
14.5
2
100
0
58
48
0
51
0
1.00
1052749--1052816
16
4.1
16
83
5
82
58
1
0
39
1.07
1052748--1052831
17
4.8
17
69
16
64
59
1
0
39
1.05
1052729--1052859
36
3.7
34
70
12
104
57
1
0
41
1.08
1053312--1053350
18
2.3
16
83
12
51
43
2
5
48
1.38
1053458--1053510
24
2.2
25
86
10
74
60
0
1
37
1.08
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1054059--1054109
19
2.8
18
73
26
54
41
0
3
54
1.19
1054086--1054145
19
3.3
19
73
17
56
40
0
5
55
1.22
1058279--1058376
22
4.8
21
71
24
75
43
0
0
56
0.99

Tables:   1   2   3   4   5   6

The End!